ZMP

patl1

Ensembl ID:

ENSDARG00000017423

ZFIN ID:

ZDB-GENE-070209-83

Description:

Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:A2RRV3]

Human Orthologue:

PATL1

Human Description:

protein associated with topoisomerase II homolog 1 (yeast) [Source:HGNC Symbol;Acc:26721]

Mouse Orthologue:

Patl1

Mouse Description:

protein associated with topoisomerase II homolog 1 (yeast) Gene [Source:MGI Symbol;Acc:MGI:2147679]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa11013	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa11013

Status:

Available for shipment
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Availability:

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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000100937	Nonsense	745	765	17	18
ENSDART00000139577	Nonsense	745	758	17	17
ENSDART00000100937	Nonsense	745	765	17	18
ENSDART00000139577	Nonsense	745	758	17	17

The following transcripts of ENSDARG00000017423 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 1 (position 53264201)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	52133772
GRCz11	1	52768510

KASP Assay ID:

2259-1169.1 (used for ordering genotyping assays)

KASP Sequence:

TCATCACCGCTGTTCACTCCTCCAAACCTGGTGTCTCTGTTCTCTCGATA[T/A]GTGGACCGCCAGAGACTTGAACTCTTACAGGAGAAACTACAGTGAGTTTG

Long Flanking Sequence:

ATCCAACTGATATTTTTGTTTTTAAGTGAACTAACCCTTTAATTCTGAGTAATGATAATTGATCATAATAGAGCTGCAAATCATCATCATATTAGAGTGATTCCTGAGGGATCATGTGAAACTGAAGAGTGGAGTAATAATGCTTAAAATCAGCTTTGACTCACAGGAATAAATTACATTTTATACCATATTCAATACGAAGACCTATTTCACAAATTGACTGTTTTCACTGTAATGTTGATATACTAAAGAGCCGGTTACTTTTAAACTGTATAAACAAGAACAAAAGGCTTTACAGTGGCTAGCGTAGCAGTATTTCATTCATTCTGGTTTTGTCAGTGGTGTTTAATGCATCTGATAATGTTTTATCCTGTATTTATTCTTTTGTCCAGGACTGAATTGGTGTTCTCTGTGACCCGGGAGTTGCTGAAGGTCCCATCCTCTGCTCTCTCATCACCGCTGTTCACTCCTCCAAACCTGGTGTCTCTGTTCTCTCGATA[T/A]GTGGACCGCCAGAGACTTGAACTCTTACAGGAGAAACTACAGTGAGTTTGTGCTCCAAAACATACTGTCGCCGCTGTTTTCTTACTGGCACTCTCTTAGGAGCATGAGAGTGTGTGGATATGTTTGGAGAAAAAGTGAAAAAAAATTTTTTTTTAAATAAGTCAAGCAAAGCAAGTCTAAAATGGCCACCTAAGTTTCAATTTAGTTTACACCAATTCTCGGTTATTCTATACAGGGATATACATAATTGTAGTCAACAATAATAATACACACTACATGACAAAACTCTTGTCGTCAATCCCAGTTGTAAAAGCAGCAAATAATAACTTGACTTCTAGTTGATCACTGGATAAGGTGGCAGAAGGTCGATTTTTATTTATTTATTTATTTTGATTTTTTTCTTGAATCATCTGCATCCCAGTCATAACAATTACTGCAGAAGACTTATTGGAACCAGCATGGACCCAAGATTTTCATAGAAATCAGTCAAGTTTGGTGAA

Associated Phenotype:

Not determined