ZMP
sc:d0319
Ensembl ID:
ZFIN ID:
Description:
cDNA, clone cssl:d0319 [Source:UniProtKB/TrEMBL;Acc:A8BAV3]
Human Orthologue:
SLITRK2
Human Description:
SLIT and NTRK-like family, member 2 [Source:HGNC Symbol;Acc:13449]
Mouse Orthologue:
Slitrk2
Mouse Description:
SLIT and NTRK-like family, member 2 Gene [Source:MGI Symbol;Acc:MGI:2679449]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11011 | Nonsense | Available for shipment | Available now |
| sa15552 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11011
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005738 | Nonsense | 64 | 854 | 1 | 1 |
| ENSDART00000005738 | Nonsense | 64 | 854 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 14 (position 20275155)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 18957444 |
| GRCz11 | 14 | 19258891 |
KASP Assay ID:
2260-7452.1 (used for ordering genotyping assays)
KASP Sequence:
GTGAAAACAAGGCTTTTACCACGGTCAGCCTGTTCCAGCCTCCGCAAAAC[A/T]AAATCAGTCAGCTCTTTCTGAATGGAAACTTTCTCACCAAGATAAGCCCG
Long Flanking Sequence:
GAAGACAGTTAAAGCTCTAAGACTCTCGAAACTGTGGTGCCTCGGATGCGCTTTAAAGTGCTGCATGAATGCCTGCTCATTATCCCGGGATTTCACTATCACTGCGAGGAACGACGATGCGTTCGGTCCAGCAGCGGCCACAGAGCGCTCGGTGATGGATGTCTTCTCTATTCCGCCTTTTGGGAATTAAGGAGGGTCAATGGAGAGCCGTGCGCTTTTGTGCGCCTTTTAAAATCTTCTTTTAAGGCTGTGCATGCCTGTTTCGAGATTTGCACATTAATGCTGGGGCTTTCGGCGTTATTGCTGTAAAAATGCTGAACAACATTCTCTTGCTGAGCGTTTTAACAGTGACCAGTTTCCCTTCAAAGACAGACAGCCGCAAAACTTCCAAAGACATTTGCAAGAACCGGTGCTCCTGCGAGGAAAAGGAGAACGCGCTGAATATCAATTGTGAAAACAAGGCTTTTACCACGGTCAGCCTGTTCCAGCCTCCGCAAAAC[A/T]AAATCAGTCAGCTCTTTCTGAATGGAAACTTTCTCACCAAGATAAGCCCGAACGAATTCCTCAATTATGGTAATGTAACATCTCTTCATTTGGGTAATAATGGCTTGCAGGAGATCAAAACTGGGGCATTTAATGGGTTAAAAAACTTGAAGCGTCTTCATCTCAATAATAATAACCTGGAAATCATAAGAGAGGACACTTTTTCTGGCTTGGAGAGTTTGGAGTATCTGCAAGCTGATTATAATTACATTAGTGCTATAGAGGCAGGGGCTTTTAACAAACTGAATAAACTCAAAGTCCTGATCCTTAACGACAACCTTTTGCTCTCTCTACCTAACAATATATTCCGCTTTGTCATGTTGACGCATTTGGATTTAAGGGGAAACCGGCTGAAGACGCTACCGTTTGCTGGCGTTCTTGAGCATATAGGTGGAATAATGGAGATTCAGCTGGAAGAGAACCCATGGAATTGCACTTGTGATTTGATACCCCTGAAAGCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15552
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000005738 | Nonsense | 334 | 854 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 14 (position 20275965)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 18958254 |
| GRCz11 | 14 | 19259701 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGTCACGTCTAGCAGAGATAAACACGTATTCGGGCCTATCATGGTGTAT[C/T]AGACGCGCTCGCCAGTCCCAATGACCTGTCCGGGCATTTGCGTGTGCACG
Long Flanking Sequence:
ACGACAACCTTTTGCTCTCTCTACCTAACAATATATTCCGCTTTGTCATGTTGACGCATTTGGATTTAAGGGGAAACCGGCTGAAGACGCTACCGTTTGCTGGCGTTCTTGAGCATATAGGTGGAATAATGGAGATTCAGCTGGAAGAGAACCCATGGAATTGCACTTGTGATTTGATACCCCTGAAAGCCTGGCTGGATACTATTTCGGTCTACGTGGGGGATATTGTTTGCGAGACACCATTCAGGCTGCACGGTAAAGATGTCACACAGCTGATCAAGCAAGACCTTTGCCCCAGGCGCAATCCTGGAGATGCAAGTCATCGTGCGATGCAACCACCATCTGATTCCCAATACCAGGGTCTGTCTCCAACTCTGCGGCCTCGAGTCACGCCGACAAGAGCCCCCAAGGCCTCCCGCCCCCCCAAAATGAGATACCGCCCCACTCCTCGTGTCACGTCTAGCAGAGATAAACACGTATTCGGGCCTATCATGGTGTAT[C/T]AGACGCGCTCGCCAGTCCCAATGACCTGTCCGGGCATTTGCGTGTGCACGTCTCAAAATCCAGACAGCGGATTAAACATCAATTGCCAGGAACGGAAACTTCAGAACATCTCTGAACTTCAGCCCAAACCGTCGTATCCAAAGAAGCTGCATTTGACTGGTAACTATTTGCAGATCATATATAGAACAGATCTGACAGAGTATAGCTCTCTTGAGCTCCTTCACTTAGGGAATAACAGAATAGCAATCATTCAGGACGGAGCCTTTGAGAATCTTACCAGTTTACGGAGGCTTTATCTGAATGGAAACTACATCGAAAGCCTGTCCCAGTCTCTGTTCGCTGGGCTGCAGAGCTTGCAATATCTCTACCTGGAATACAACATCATTAAAGAGATTTTACCCCACACCTTTAACTCGCTGCACAATCTGCAGCTATTATTTCTTAATAATAACCTGCTGAGATCCCTTCCCGACAATGTGTTTGGAGGTACCATGCTGACA
Associated Phenotype:
Not determined