Busch Lab

ZMP

COL7A1

Ensembl ID:
ENSDARG00000021720
Description:
collagen, type VII, alpha 1 [Source:HGNC Symbol;Acc:2214]
Human Orthologue:
COL7A1
Human Description:
collagen, type VII, alpha 1 [Source:HGNC Symbol;Acc:2214]
Mouse Orthologue:
Col7a1
Mouse Description:
collagen, type VII, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88462]

Alleles

There are 13 alleles of this gene:

Allele Name Consequence Status Availability
sa33922 Nonsense Mutation detected in F1 DNA Not yet available
sa45261 Nonsense Mutation detected in F1 DNA Not yet available
sa20773 Essential Splice Site Available for shipment Available now
sa33921 Nonsense Mutation detected in F1 DNA Not yet available
sa38571 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa20772 Essential Splice Site Available for shipment Available now
sa20771 Essential Splice Site Available for shipment Available now
sa33920 Essential Splice Site Available for shipment Available now
sa12429 Essential Splice Site Available for shipment Available now
sa26794 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa1097 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa33922
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Nonsense 277 1561 18 81
Genomic Location (Zv9):
Chromosome 6 (position 40168404)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40240004
GRCz11 6 40237540
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGGCCACATCCTAACTGTGGTCTATTAATGTTTTAGGGACTGCCAGGT[C/T]AATCAGGTCAACCTGGGACAAAAGGAGACACAGGCGATCCAGGGGAAGAT
Long Flanking Sequence:
TTCAGAGGTAACAAGTAATCAAGGTAACAGGTGACTTCTTTTCTTTTTCTTCAGATGCAACTCTCTTTTTTTATTTTCTTAAACACTGCTATTTGCACTTGTGGCTTCTGAAATACAGAAATCTATTACTATGTATCAAAGGGAATCAGGTGAAGTAAAAAAGCTGTAGAAAAGTATTCTTATAGCATTACATAATATTTTCTGTAGGAGGTCTGATCTCTCCTTTTGTTTCTTTAGGGACTTAAAGGAGACAAGGGAGAGGATGGCATTGCAGTAAGTTTTTTGTTGTTGTTATCATTTCTCATAATTCATGTGCTTTTTATGTATTGTTGCTTTGTTTCTTGTTGCATAGGGAGAACCTGGGTTGCCGGGTAAACCAGGGGAGAGAGGTCTAAGAGTAAGTACACAGATTTGGTAATGTATGTGATGCTAAATTGTTGTTCCAAGTAGTTCGGCCACATCCTAACTGTGGTCTATTAATGTTTTAGGGACTGCCAGGT[C/T]AATCAGGTCAACCTGGGACAAAAGGAGACACAGGCGATCCAGGGGAAGATGGACGAAATGTAAGACATACTATATGGCTGACTGAATGTATTACATGGGTCAACGACTATGGTATCTGCGTCATATTAAAGAAAAAATTAAAAAGTTAGCATATTAATACAAAATGTAATTTGTCAGTCCTTATTCAGTGTAATAGATATATTTATGTAAAATCAAACAACATACTTAATTCTGTTTTTGTTAAAATATACAAAATATGCAATAATTTGCACAAAAATAATATAATCTGAGACCCAAAAATTAATTATTTTAATATACCATCACATTTTTCTTGTTCTAAATATGCCTGACAAACGAATTTGAAATTTTAGAGGGTGTTTTCTGTAAAACATAGAAAAAATCATAGCCATATTTTGCAAAACATAAAAAATAAAAGAACAAATATCAACAAGACACGTGTATTGGAAACAATACTTGCATTTATTTTTGTATTGCTTACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45261
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Nonsense 285 1561 18 81
Genomic Location (Zv9):
Chromosome 6 (position 40168380)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40239980
GRCz11 6 40237516
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTAATGTTTTAGGGACTGCCAGGTCAATCAGGTCAACCTGGGACAAAA[G/T]GAGACACAGGCGATCCAGGGGAAGATGGACGAAATGTAAGACATACTATA
Long Flanking Sequence:
TAACAGGTGACTTCTTTTCTTTTTCTTCAGATGCAACTCTCTTTTTTTATTTTCTTAAACACTGCTATTTGCACTTGTGGCTTCTGAAATACAGAAATCTATTACTATGTATCAAAGGGAATCAGGTGAAGTAAAAAAGCTGTAGAAAAGTATTCTTATAGCATTACATAATATTTTCTGTAGGAGGTCTGATCTCTCCTTTTGTTTCTTTAGGGACTTAAAGGAGACAAGGGAGAGGATGGCATTGCAGTAAGTTTTTTGTTGTTGTTATCATTTCTCATAATTCATGTGCTTTTTATGTATTGTTGCTTTGTTTCTTGTTGCATAGGGAGAACCTGGGTTGCCGGGTAAACCAGGGGAGAGAGGTCTAAGAGTAAGTACACAGATTTGGTAATGTATGTGATGCTAAATTGTTGTTCCAAGTAGTTCGGCCACATCCTAACTGTGGTCTATTAATGTTTTAGGGACTGCCAGGTCAATCAGGTCAACCTGGGACAAAA[G/T]GAGACACAGGCGATCCAGGGGAAGATGGACGAAATGTAAGACATACTATATGGCTGACTGAATGTATTACATGGGTCAACGACTATGGTATCTGCGTCATATTAAAGAAAAAATTAAAAAGTTAGCATATTAATACAAAATGTAATTTGTCAGTCCTTATTCAGTGTAATAGATATATTTATGTAAAATCAAACAACATACTTAATTCTGTTTTTGTTAAAATATACAAAATATGCAATAATTTGCACAAAAATAATATAATCTGAGACCCAAAAATTAATTATTTTAATATACCATCACATTTTTCTTGTTCTAAATATGCCTGACAAACGAATTTGAAATTTTAGAGGGTGTTTTCTGTAAAACATAGAAAAAATCATAGCCATATTTTGCAAAACATAAAAAATAAAAGAACAAATATCAACAAGACACGTGTATTGGAAACAATACTTGCATTTATTTTTGTATTGCTTACTTTTTTGGATGCCTGATTTAAAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20773
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 670 1561 36 81
Genomic Location (Zv9):
Chromosome 6 (position 40152723)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40224323
GRCz11 6 40221859
KASP Assay ID:
554-6474.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACCTGGAAGAGCCGGTGAACTTGGAGAAGCTGGCAGACCTGGGGAGAAG[G/A]TAACAAATAAAAATGCATTAGGATTTTGTCACTGTATCTTTTTTTATACA
Long Flanking Sequence:
CTGTCGGGAAAAAAGGGCGAAAAAGGAGAAGTGGGACCTAGAGGCCCTTCAGGAGCAGATGTGAGTTTTATGTTCTTGTGTGATTGAGTGGTGTCTGGTATTCAGTAGCTGGATGAGTGCTGTGTTACAGGGCTTTTTGCAATGAAAATAATGCCACAAAGCCATTGGTGCTGTCCATGGTGCTGAATCAACCAACAACTTACAGTTTTTTTCCCCAATGAATTATTGTCATTTAAATGTCTTATTTTTAAACACCATACTTGTTTTTCAATTATGTATTTGCTTTACAGGGTGCACGGGGTCTTCCAGGTGAGCGAGGTATGAAAGGAGAGCAGGGTGAGAAAGGACCTGCTGGTCCACAAGGTCCTACAGGCAGGGCAATTGGAGAGAGGGGTCCTGAGGGTCCGCCAGGACAAGCAGGTGAACCTGGAAAGCCTGGAATACCAGGAGTACCTGGAAGAGCCGGTGAACTTGGAGAAGCTGGCAGACCTGGGGAGAAG[G/A]TAACAAATAAAAATGCATTAGGATTTTGTCACTGTATCTTTTTTTATACATGTTTTTGAAGATAAATAGCTGATTGAAAAAATCATGATATGAAGATAATATAGAAATGAGATTATTGATTGTCTTTGTTGCAGGGAGATAAAGGGGAGAGAGGTGACAAAGGACCAGCTGTAAGTATCATTGCTGTCATTCATGCAAAGCGAATACATGTGAATGAAAGTAATCTAGCCTAATGAAGAAATAAACGTAACTGTTTTTAATTTTCATGTTTTAAGGGTCCAGCAGGATTACCCGGCTTAGGGGGGCCTCCAGGGCCAAAGGTATTTCACATTGTAATTTTTGTACACAATAGTATACAATTTGTAGTTTTCAATTTTGTTTATTAAAAATGAGTAAGTATGAGAGTAGGGAAGAAAGCCTTGAGAATATGCATGCATGCTCAATTAACGTAAGACATCATTTAATTCAATTTAAAACCCTGCATGGATTATACTTATCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33921
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Nonsense 720 1561 39 81
Genomic Location (Zv9):
Chromosome 6 (position 40151327)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40222927
GRCz11 6 40220463
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGAGTGGTTTGCCTGGTCCAAGGGGTCTGCCAGGCCCTGCAGGTGTC[C/T]GAGGAGAGCCAGGTGCAGTAGGACCTCAAGGATCTCCTGGAGAGCGGGTG
Long Flanking Sequence:
GGGACAGATATTTAAACACCTTAATGCATTGGAAGAAATGCAAGCATAACCAATGACCCCTGTCAATAACATAGTAATTAAAGATTGAGTGAAATTGATGTTTACTATTCATAATCTATAATGTTCTTAATAGTGTGCCCAAGGATAATGCATTTCTTGTGGTATTATAGGAACAATTTTACTTCATAATTACTTGGATTTATACATTACATGACCAGCTAAATTATATTTTGCTTTCATGTCCATTTGTCCATCTGTGTTCTGTTGTTTAGTTGTTCTGTCACAGTTTAGTGTTTTTATATATTGTATTATTATTGTATTGTATTGTTTTTCTTCTATATTGTGTTGTAGTTTTATAAAATGCAAAAAGCTCAAAAATAAACTTTAAAAAAAAAGAAAATTAGTAAGTATGCTTTTGAAATTTTCCCCCCAAGGGAGATTCTGCTTCCGTTCAGAGTGGTTTGCCTGGTCCAAGGGGTCTGCCAGGCCCTGCAGGTGTC[C/T]GAGGAGAGCCAGGTGCAGTAGGACCTCAAGGATCTCCTGGAGAGCGGGTGAGGCTGGAGTTTCTGAAACATTTATATGTATAGCAGCATGTTATCTAGGTGCTTGACCTTAGTTGACAGTCTGATTTGTGATATGCTCCCCTCTCAGGGCTACACAGGTGCTCGTGGGGAGAAAGGAGACAAAGGAGCAAGCGGAGAAAGAGGAAAAGATGGCTCCCCAGTGAGTATACCCTTAACTGACAAAAGAACTTAGTCTCTGTTATTTAATTTGCAATCACACTGTTGTTTTCTAATCTTAGGGAAGTCAAGGAGAGTCAGGAAAACCAGGACAAGATGGGAAGCCGGTGAGAAACAAATTCCTTTTAGCTATTATCTTCCTGTTTTAGTTTACATTTTTAAAATTACTTTATATCTAATTAACACTGTATTTGATGTTGTTCTGAGATATCTGCCAAGGTAAGCATCAAAAAGCATTATTATTTTTTTCTTTTTCCACACCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38571
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 824 1561 45 81
Genomic Location (Zv9):
Chromosome 6 (position 40147398)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40218998
GRCz11 6 40216534
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACATTTTCTTGTTTAGGGTGACCATGGAGAACCAGGCATTGGAGTTCAA[G/A]TAAGTTTTCCAACTGAGTAGCGATAGAATGCTTTCCTTCAGGCGGTTTGA
Long Flanking Sequence:
CATATACTGTAGGAGCAGAAAATATAGGGTAGAAAACGGTTATCGTCTCATGCCTAGTCTAAAGAATATAGTACAGTATGTCTGTCCATTTAGAGCTTGTGTGTGCTGTTTATGTGTGCATGGGTGTATATATGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGAGTGTGTTCTCTATATTTGTATCAGCACCTTGTTCATATTAAATATGTATTCTGCACAGGGGAATCCAGGAGAACCAGGAATAAGAGGACCAACTGTATGTATATATGCACATTCATGTACAAAAGCAAATTAAATATAGTATTTCTAACCTTTGCTTCGATTTTTCAGGGTCCGATGGGTGGAAATGGACCCCCGGGGCCTCCTGGCGTGAAGGTTAATGCTGCATAATTTGATCTGATTGTCGTGAACTTTGTAATTATAAATAACAACGCATGTATATGTGCACATTTTCTTGTTTAGGGTGACCATGGAGAACCAGGCATTGGAGTTCAA[G/A]TAAGTTTTCCAACTGAGTAGCGATAGAATGCTTTCCTTCAGGCGGTTTGATACAAAGCAATGTGTTTTCGGAGTTACATAACTAGAGTTTACTCACTCTTCAATCTTTTCTCTTCATTTTTCAAGGGCCCTCCTGGACCTCAGGGCAACAGAGGTTTACCTGGACCTGCAGGCACTCCAGGAGCCATAGTAAGATCAAAACGCAATATTGGACTCATTCCAACAGCTCAGATGCTTTTGACCTCCGTCTCTCCGTAGAGGTCATTAGACAGTATCTGCAGCTTCAGCTTAGAGCCTCTTCACTCGCTCAGTTCATCTGTCTGTGTTTTATTTATCCTTGGTGCTTGTAGTGTTTAGTTTGCCCTTGTTCAGAAAGCAAAATTACAGTGTTTTTATTCCTCAAGTCCAGAAGGCCTGTTTCAGCAGATAGCACATAAATATTAGTATACCGTTGTTGTTCCGGTGGGTTTAACGTAGACATATTGTTTTCATAGATACTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20772
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 824 1561 45 81
Genomic Location (Zv9):
Chromosome 6 (position 40147397)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40218997
GRCz11 6 40216533
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACATTTTCTTGTTTAGGGTGACCATGGAGAACCAGGCATTGGAGTTCAAG[T/A]AAGTTTTCCAACTGAGTAGCGATAGAATGCTTTCCTTCAGGCGGTTTGAT
Long Flanking Sequence:
ATATACTGTAGGAGCAGAAAATATAGGGTAGAAAACGGTTATCGTCTCATGCCTAGTCTAAAGAATATAGTACAGTATGTCTGTCCATTTAGAGCTTGTGTGTGCTGTTTATGTGTGCATGGGTGTATATATGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGAGTGTGTTCTCTATATTTGTATCAGCACCTTGTTCATATTAAATATGTATTCTGCACAGGGGAATCCAGGAGAACCAGGAATAAGAGGACCAACTGTATGTATATATGCACATTCATGTACAAAAGCAAATTAAATATAGTATTTCTAACCTTTGCTTCGATTTTTCAGGGTCCGATGGGTGGAAATGGACCCCCGGGGCCTCCTGGCGTGAAGGTTAATGCTGCATAATTTGATCTGATTGTCGTGAACTTTGTAATTATAAATAACAACGCATGTATATGTGCACATTTTCTTGTTTAGGGTGACCATGGAGAACCAGGCATTGGAGTTCAAG[T/A]AAGTTTTCCAACTGAGTAGCGATAGAATGCTTTCCTTCAGGCGGTTTGATACAAAGCAATGTGTTTTCGGAGTTACATAACTAGAGTTTACTCACTCTTCAATCTTTTCTCTTCATTTTTCAAGGGCCCTCCTGGACCTCAGGGCAACAGAGGTTTACCTGGACCTGCAGGCACTCCAGGAGCCATAGTAAGATCAAAACGCAATATTGGACTCATTCCAACAGCTCAGATGCTTTTGACCTCCGTCTCTCCGTAGAGGTCATTAGACAGTATCTGCAGCTTCAGCTTAGAGCCTCTTCACTCGCTCAGTTCATCTGTCTGTGTTTTATTTATCCTTGGTGCTTGTAGTGTTTAGTTTGCCCTTGTTCAGAAAGCAAAATTACAGTGTTTTTATTCCTCAAGTCCAGAAGGCCTGTTTCAGCAGATAGCACATAAATATTAGTATACCGTTGTTGTTCCGGTGGGTTTAACGTAGACATATTGTTTTCATAGATACTGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20771
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 919 1561 50 81
Genomic Location (Zv9):
Chromosome 6 (position 40143991)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40215591
GRCz11 6 40213127
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGTGCTGTGCAGTCTGTCACCGGACCCCCTGGAATGAAGGGTGAGATG[G/C]TGAGTTGTTGCCATGGTTACATCATAGCGAACACTGTGTGCAGATCAACC
Long Flanking Sequence:
ACTTGTTACAGTAATGAGGTTATCTCTTTAACATGATTTGATAAACAGGGAGAGGGGGGCAAGCCTGGGGTCCCAGGAAGAGACGGTGCTCCGGGTAAAGATGGCCTGCCAGGCTTAAATGGTAAACAGGTGAGTGCTTAGATGCCCTTGATGTTTACAAAGAGATACGTGCATTCATTTAATAATCCTCTACAACTGTTTTTCGTGTTTTTTCTCTCCTTTCTTATCTTCCCTACTTAACCACTCTTTCTCTGTTGTTATTATTTTTCTGTCACTTTATTCAGGGTATTGCAGGACCGGTCGGTCCCCAAGGACTTAAAGGAGAGCAAGGAGACAGCGGTCCTCCAGGAAAGGTATATCTGCATGTTTGAGTTTGAACGTAATATGTAGTTTGATTGAGGCTTTGTCTTTTATTTCCAACCTGTTCAATTTATCTCCATTTATTTTTCTACTGTGCTGTGCAGTCTGTCACCGGACCCCCTGGAATGAAGGGTGAGATG[G/C]TGAGTTGTTGCCATGGTTACATCATAGCGAACACTGTGTGCAGATCAACCTGTCTCACCTGCCTGACAGATAATCTCATTTGAGGCAAACATAATGTTAGAGCGCATGTACGTGAGCGCTTCAGCAGATCTTCTCTCAGTGTTGTCACACTCAAATACCAACCGAGCAGCAGCACAAAGTATTAAAGTAAACCTCGGACAAGTGATGACTTTTATTTGTTCAATCCAAGCAGAAAGGTTAAGTTTTGTCTGACTTTAAGCTAATGCTTTGTGACTGCCATGGGGAAAAAATGCTTTCCTTGATCCTCAGGTTTGTTTTTCATAGTAAAAAGTACTTGGTTTTTGTGTTCACTTTTAAAACAAATCAACAGAAGCTATGGAGCCAGATCAGTCTCAAAAAATAATACATTTACAAAATAAAATGTATACATGGATAGCACAATTCACATTTACAAAAAACTAGTTGTAAGTTTAAAACACAATTTGTTAATACACAAATCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33920
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 1064 1561 56 81
ENSDART00000033844 Essential Splice Site 1064 1561 56 81
Genomic Location (Zv9):
Chromosome 6 (position 40140228)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40211828
GRCz11 6 40209364
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAACAGGAAATCCAGGAACACCAGGAGATGCTGGACCACCTGGACCCACT[G/T]TAAGTCACTGACAGGTTCAAATTAAATAGTGTGTGTAGGCATTTAAATAC
Long Flanking Sequence:
AACTCATTCCACATTGTTTAGGTGATAAGCTAAATGATAACTACAGTATAGTCAGCCACAGAAACTGTCAAAAATCTAGCCTGCTTATTAAAGTAAATGTTTTTAATTGGTTCCAGGGTGACCCTGGCTTACCAGGTCCTCCGGGCCCTCCTGGGCCACGTGGATTAGATGGGACGCCAGGACTGGCAGGACAGAGAGGGGAAGCAGGTCAGCCAGGACCCCCTGGACTACCAGGAGAAAGGGTTAGTAGAGTCACTGCAGACACAAAAACAAATCTAGACTAAAAATGACATACGTTTAGGTAGACTATTACTTCATGTATTCAGTAACATTAAACACATTTCCTAATTTTTTGTTGTGTCCCTCTGCTGCATCTAATGATTGATTGATGATGAGTAATTCTGGTGGTGCTTTTTATTCTGTTTAAGGGTCTTAACGGAATTATAGGCAAAACAGGAAATCCAGGAACACCAGGAGATGCTGGACCACCTGGACCCACT[G/T]TAAGTCACTGACAGGTTCAAATTAAATAGTGTGTGTAGGCATTTAAATACAGTTTTTTCTTAGAGCAAGTATAACAGCGATGTCCTTATCTTCATATTAGGGTGCTGCAGGCCTTCCAGGACTTAAGGGTGATAAGGTATGTCATGTGTGGCTTGCAGAGCTTCTAGCCTACAATTTTTCTTTTTAATTTAAAAAATTCAGAAGCACTGTCAAAAATTTAGCAGCTGATGTCATGCAGATGAAAAGGGAGCTTACAGTACCCATTATGACAGAAAAATATGGGAGACATGATAAAGCAATGATGAACCAATGTAGGTAATTTAACAGTTGATGAAATGAAATAGATGAAATTAAACATGCTCGTCTTCATTTCTTGGTTTTGAACCGTTAAACTAGAACTTTTATTAACTGCATGGTAATTTTAAACATCTAGTTTGCTGGCAACATAGAGTTCTCATTAACAGATGGTTGGCACATGTAATGTTGCATTTTCAAACGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12429
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 1178 1561 63 81
Genomic Location (Zv9):
Chromosome 6 (position 40135348)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40206948
GRCz11 6 40204484
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACAAGGTGAAAAGGGTGCAAAGGGACAGGAAGGACCACCAGGAGAACAG[G/T]CAAGAATTTTTATCAWCTATTTATAATGTATTTMAAAATGGTAAATATAA
Long Flanking Sequence:
ATACAGAGAGGTCTTACATAATCCTCAGGGGGTCATTTTGCATATTGGATATATATTCTGATCTTATTTGTACATAATTGATGGGTTTTATCTCTCTGTATTTGATTTTGAATCTTCAAGGGAGAAACGCAGCTGGTGGGAGGGCCTCCAGGAGAGAAAGGAGTGAAAGGAGAAACCGTAAGTCAGATTTTTTGATGGAGCTGTCTCAGGTGTTTAACCACTTTAGGTCACTTTATGAAAGATTAAAGTCCAATAATGAAGGTTAGGTTCCTGAAGGGACTCTTGCCTATGAGAAGTGGTCATAAAAAATTCATGCTTGCCTACCTCAGGATCTATAGACTGTTAACAAGTCAGTAACCAACAGGATAAAGGCAGATCTTTTGGGTCGATCTGATCTAATCAGTTATATTGATTGCTGCTCTGCTCAGGGTGAGCGAGGACCTAAAGGCGGACAAGGTGAAAAGGGTGCAAAGGGACAGGAAGGACCACCAGGAGAACAG[G/T]CAAGAATTTTTATCATCTATTTATAATGTATTTAAAAATGGTAAATATAAATGTATTAATGTTAATATTAGTTTTTAGTTGTTTTTTTCTATTCAGACAGAACACTTGTGGCAGGGCCGACATGAAAGAGAAGATTAGAAAATATGTGTAGCAGATTTTTGTTTATTAAACAAACAAAAAAAGCAAAAAAGTAATCCAGTGGTGTAGATTAGGGGTATAACGGTACATGTATTCATCCTGAACCGTAACAGTCCAGGGGTGATAGTTCTGTTCACATGTTCCCACAGTAAATACAGGCAGTCCAGATGTGCGTCACTGCTAATAGACAGAAAAAATCCTCAGCAGTGCAACAACTTAACAGTCATTCACAACGAACACCTCTGAAAACACTGATTGTTGCTAGAAGGGATACAGTGTTTTTCTGTTGTTAGCTGAATGTTTCACTCAACCTTTGAAAGTTTAATACGCAGTCTAATTATTCATTTTTATTTTTTATTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa26794
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Essential Splice Site 1202 1561 64 81
Genomic Location (Zv9):
Chromosome 6 (position 40132309)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40203909
GRCz11 6 40201445
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGGTTCAACCGGCTTCCAAGGAGCACGCGGCCCTGGTGGCCAGAAGG[T/G]GAAATAAAAACTCTCCTCGACACATGCATATACATGAATACATTCGAGCA
Long Flanking Sequence:
TGGAAGCAAACACTTACTCTAAACCAAATGTTACAATTTTATAGAATTAGCTTAGTTAGCTTATAATTTAAACATTGATGCATTTTTTTAAATGTTGCCAATTCAAAACTTGCTTATTTTTACGTGTTTCTATAGCTGGTCTACTAAAATTCCATAATTACAGACTCTACAGTACAATCGTAGAACTGTATCATTCATTTTTTCTTCCAAGTGTGGACTTGGAAGAATCTGACGATGAATATTCGAGTATGTTAAAGTATGTTACAAATTTTCATGTGAGATTGCATCAATCGCTTCAATCAGAAACGTCTAAAAAGCAGATGACTTCATTTATTCTTAATTTTGTCTACTTGCTGTTATGCAGAAATATAGATAAACAGCAGCTATTAAACAGATCTCATTCTTGATTCTTCTCTCATGTTGGTAGGGTCTAAGAGGAGAGCAGGGAGAAAGAGGTTCAACCGGCTTCCAAGGAGCACGCGGCCCTGGTGGCCAGAAGG[T/G]GAAATAAAAACTCTCCTCGACACATGCATATACATGAATACATTCGAGCATGCCTGCGTCTGAATTTCACACTAATCGGATGTTTGCTTATCATTTACAGGGGGAAGCAGGGCAGCCAGGTGTCCCAGGAGAAGCAGTGCGTATTCATATTTAGCAGCCTATAACGTCAGCGCATGACTGGCACATGCAGTCCCCAGACTCAGCCGTTTCCCCATGACTGAATCTTATTTTTTTTTATCTGTCCTCTACAGGGAACACCTGGTAAAGATGGCCTGCCTGGCATGAGAGGAGAGAAGGGAGAAGTTGGGCTCATAGGATTGCGAGGCCTCAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTTTTAATGGTTGTCTCTTTGATTAAAACTCAAACTGACTCTTGCAAGCTCTATCGGTAACCTTGATGAGCCCTTCAGACCAGATGATCACACTGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1097
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033844 Nonsense 1251 1561 68 81
Genomic Location (Zv9):
Chromosome 6 (position 40131285)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 40202885
GRCz11 6 40200421
KASP Assay ID:
554-0999.1 (used for ordering genotyping assays)
KASP Sequence:
GACTGAGCTTTAATGGCTTACAGGGGGAACGAGGCTCCAAGGGGGTTTGT[G/T]GACCAAGCGGACAAAAGGGAGACAAGGTGAGTAACATGGAGAGCTTGAGG
Long Flanking Sequence:
CCAGGCCATTGTATCTGACATTCATCTGCTTATGTACCTTAGAGCCACCGAATTAAAGTTTTTGTGTGTGCAAGTGCGTATGTGTGTGTGTGTCTGCGTATGTGTAGAGAAATTGATTTGTCGAGTGCAGCGAGGCACATGAAAGACTCCCGCGTATGAATCATTCCTCTCAGGGATTCATGGGCCGCTGCAGACAGTACTAGCTGCCCTTCTGCCAGAGGCAACATGAACGCACTTACATAGCAGATAAGAACTTTTATCTGGGTTCAACATCCCTGACAGACCTCTATCTGTTGTCAGTAATGAGAAAGACAGTAATTGAAGGGTTTGTGCGCTCGTGTGTATGACTGACACATGAATGGTGCTTTATTCTTCCTAAATAGTCCCTCCCAGAGAGCGTTTCTTTTTCTGGCGTTGTTACTCACTGTCACAATGAGTGATTGACAGTTTGACTGAGCTTTAATGGCTTACAGGGGGAACGAGGCTCCAAGGGGGTTTGT[G/T]GACCAAGCGGACAAAAGGGAGACAAGGTGAGTAACATGGAGAGCTTGAGGAAAGTTTGTGTTGTGTCTGCTTGTTTTTGCTGGGAGTGACGAAATGCGTCTGTTCACAGGGGGATTCTGGGATTAATGGAAGACCGGGATTGCCTGGGAGGAAAGGAGAGCAGGTACGGATGCATGTATTTATGAGTGATGCACTGTATAAAATGATTTGTTCGCTCAACTTAACTTAGTTAAGTCATCTTGTTGCATTGACTCAGTTAAATTGTATTGACTTAATTCTCAAGGTTTTCTCAACTTAAAATGTTTACTTGACATCGCTAAATAATTGACCCAACTACTTATTTCAAGTTAACTGAACTTGCAATGTTTAGTTTTAATAGTTTCCTTCATTATCAAATTAGCAGAACTTGCCATATTTAGTTTAAATAACTTAACATACATTTTCAAGTTCACTGAACTTAATTTAGCAGATTTTCTCTGCTAAAAGAACAGACAACGAAA
Associated Phenotype:
Not determined