Busch Lab

ZMP

cacna1c

Ensembl ID:
ENSDARG00000008398
ZFIN ID:
ZDB-GENE-020129-1
Description:
voltage-dependent L-type calcium channel subunit alpha-1C [Source:RefSeq peptide;Acc:NP_571975]
Human Orthologue:
CACNA1C
Human Description:
calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:HGNC Symbol;Acc:1390]
Mouse Orthologue:
Cacna1c
Mouse Description:
calcium channel, voltage-dependent, L type, alpha 1C subunit Gene [Source:MGI Symbol;Acc:MGI:103013]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa10930 Nonsense Available for shipment Available now
sa15296 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa10930
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016938 Nonsense 291 2195 7 49
ENSDART00000028856 Nonsense 292 2168 6 47
ENSDART00000132909 Nonsense 292 2196 6 48
Genomic Location (Zv9):
Chromosome 4 (position 19371735)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 20715070
GRCz11 4 20436045
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTTCCCCTCCTTCACATCGCTCTGCTCRTTCTGTTCGTCATCATCATTTA[T/A]GCCATCRTCGGCCTCGAGCTCTTCATGGGCAAGATGCATAGAACCTGTTT
Long Flanking Sequence:
ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAACCTCTAAGTGGCATCTAGAATAAGCATTTTTCTTTGCCTGTCATGTTTATTTTATGTTAAAATCAATGAAAATAACCTATTCTTTGCCATAAAAAAGTAAAATTACTGAATCAAGACATAGGAGCCTGAGAAAAAAGCAAATGTTTTTGCATCTGAACTCTTCATATATGTTTTCTTATATATTAAAGGTCAACAATTAGCAGAACAGTTTTTTGCAGATTTTTGCGAGTGGGCCTGCTGATAATATACAATATGTTAATAATAAATCCTTCATTCCCAAAATCCCCAGAGAGAAATCCTTCTCTTCTGTGTTTTTAGCTTTGTTTCCTGTCTGCTTGCAGGTTTACAGGTGGTGCTGAACTCCATCATTAAAGCCATGGTTCCCCTCCTTCACATCGCTCTGCTCGTTCTGTTCGTCATCATCATTTA[T/A]GCCATCATCGGCCTCGAGCTCTTCATGGGCAAGATGCATAGAACCTGTTTCTTCTATAAAGATGGACACAAAGGTCAGGACTTCAGCTTTTGCTTCTCCCTTGAACTAGTCATTGACCCTGGTGTTTACCCAGATCAACTGTTTACTTTTAGGTCATATAGCTGAAGAGAAGCCGGCCCCCTGCGCTCCAAGCTCCGCCCATGGAAGACACTGCTCTCCGCCCAACATAACGCAGTGCATGATGGGATGGGAGGGCCCAAATGATGGAATCACGAACTTTGATAACTTTGCATTTGCCATGCTGACTGTGTTTCAGTGCATCACGATGGAGGGCTGGACTGATGTCCTGTACTGGGTGAGTCTGCTCCAGTATCGGCACACTACACAGTCCAGTATAGAGAGGCTCGAACATCTACTTTACTGAGACATATGTATAAGACAGAATTATCAATAAATCACACTCCTTAGTTTATATCCTAAAGGACACCTACTGGTCTTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15296
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016938 Essential Splice Site 1510 2195 37 49
ENSDART00000028856 Essential Splice Site 1483 2168 35 47
ENSDART00000132909 Essential Splice Site 1511 2196 36 48
Genomic Location (Zv9):
Chromosome 4 (position 19400632)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 20743967
GRCz11 4 20464942
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTTGCCATCTTCTACTTTGTTAGCTTTTATATGCTTTGCGCCTTYCTGG[T/C]GAGYTGACATCGATATRTCTTTCCAGTAAGCAACTTTGTTATTGTATATC
Long Flanking Sequence:
CATTGCTGATCGTAATGCTGTTCTTCATTTATGCCGTCATTGGGATGCAGGTCAGATGCAGCTTTATTTGCTCTTCCAAACTTCCTCCTCCTCTTTCCCCAAAGAGGTGCATTGATGTCTGTTACAGCTCCTGTACTTGTGCACAATTCATGATGTATTTTTGACTCCACAGATGTTTGGCAAAATCGCCCTGAGGGACAACAGTCAGATCAACCGAAACAACAACTTTCAGACATTTCCTCAGGCTGTTCTGCTTCTCTTCAGGTCAGTTTCCATCTAGCTCTCTCTCTCCATCACTCATTTGGTGTCTCTTTCTCACTCTGAGCTTGTGTATTTGTGTAGGTGTGCGACAGGAGAGGCGTGGCAGGAAATCATGCTGGCCTGTTCTCCAAACCGCCCTTGTGAGAAGGGGTCAGAGATCAACCATTCCAGCGAAGACTGTGGCAGTCACTTTGCCATCTTCTACTTTGTTAGCTTTTATATGCTTTGCGCCTTCCTGG[T/C]GAGTTGACATCGATATATCTTTCCAGTAAGCAACTTTGTTATTGTATATCAGCTGTGAATGTTGCTGTCAAATCTTCTCTCCCAGCATGACATCTTTTACCCCCTCCGTACAGTGTTTATCGTATCCATAATAATAGAAGCAGCGGGTGTGATTCAGGGGTTTGTGAGCCACTGTGATTTAGATTCTTCCTCTCCCGCAGATCATTAACCTTTTTGTGGCTGTCATCATGGACAACTTTGACTATTTAACACGGGATTGGTCGATACTGGGACCGCATCATCTAGATGAGTTCAAAAGAATATGGGCAGAATATGATCCTGAGGCTAAGTCAGTCACTCCTGTTTTGCCAACTTTCTCACTTGCACTTTCTCTAATCATCAATGTTTTTTAAAGAGATATACTTATACTTAGATTATTCAAATTAATATTATCATGCAGGGGTCGGATAAAGCATCTGGATGTAGTCACGTTACTGCGCAGAATTCAGCCACCTCTTGGA
Associated Phenotype:
Not determined