Busch Lab

ZMP

LOC555496

Ensembl ID:
ENSDARG00000074571
Human Orthologue:
GPAA1
Human Description:
glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) [Source:HGNC Symbol;Acc:444
Mouse Orthologue:
Gpaa1
Mouse Description:
GPI anchor attachment protein 1 Gene [Source:MGI Symbol;Acc:MGI:1202392]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa44521 Nonsense Mutation detected in F1 DNA Not yet available
sa1091 Nonsense F2 line generated Not yet available
sa2042 Nonsense Confirmed mutation in F2 line Not yet available

Mutation Details

Allele Name:
sa44521
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114431 Nonsense 137 615 4 12
Genomic Location (Zv9):
Chromosome 2 (position 2485052)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 2352704
GRCz11 2 1465122
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCCTCAGATGGTTCGGGGCACAAATGTTTATGGGATTTTGCGAGCGCCT[C/T]GAGCTCCTCGGACAGAAGCGCTCGTGATCAGCGCCCCCTGCACTCCTGGA
Long Flanking Sequence:
TTATTTGTTTTATTTATTTATTTAATTTTTTTATTAGTATTTATACTTAATTCTTATTCTATAGTATTTAATTTTTTATTAATATTTTTACTATTAAATATGTAACTTAGCAAGAGAAAAAAAATAATGCAGCAATATAAAAAATGCCTGTTCGTTCTTTTTCAGATATCTTATGATTGATATAAAAGAAAATTCACTCCTGATTGACTCAAACTGATGGATGTTGCTTATCTGTAGCACAACCACATGTCTTTTTTTAATTATTATATAATTTTTTCATTCCTTAATTAAAAAGTCTATAGGCTGGTTAGAAAAAAGGTGCAAAAAGAAAAAAAATGTTACCTCTAAAACTAATAATGTGGGCATTTAACAAAGACAAGTCCACTTTAATAAAATAAATAAATAAATAAAATACTAAAACTGAAGTACGCTTGAAGCAAATGTGCTGTTTTCCTCAGATGGTTCGGGGCACAAATGTTTATGGGATTTTGCGAGCGCCT[C/T]GAGCTCCTCGGACAGAAGCGCTCGTGATCAGCGCCCCCTGCACTCCTGGAGGTACCAACAATCAGGCCGTTGGAATCCTGCTGGGCCTGGCACAATACTTCAGGAGTAAGACTCTTTCTGATTCTGCAATATTACATTGACAAACTCATTTCACTTCTTTTTGCTTTGTAACCAACTTGATTTTGGGCACGGATGCAGGTTGTGTATGAGTGGATGTGTGTTTTGTGTTTTTACTTAATTTTGTTTTAATTTTGGTGTTTTGAATTGATGTATGAACGTCATTTCTGCAATAATTCAGTCTGTATTCAGTCTATATTCAGTCTTGTATTGCTATGCAGGAAATAAATGAACCCTAAAACATTTTTGCTTGTAAAGTTTTGGTTTGGGAAACTTTAGTTTTATTTTAATTCTTTTAAAAATGTTTTCCAATGTTTGTTTTATGGAAATATTTTTTTCAACACATTTCTAAACTTAATAGTTTTAATAATTAATTTCTGATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1091
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114431 Nonsense 388 615 8 12
Genomic Location (Zv9):
Chromosome 2 (position 2479523)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 2347175
GRCz11 2 1459593
KASP Assay ID:
554-0993.1 (used for ordering genotyping assays)
KASP Sequence:
TCGGCTACTACATGCCAGCGTTTGGCCTGCTGGCGGTCATCTTACTGCTC[C/T]GAGTATCCATTTCAGTCCAACTGTGTTTACCTTCTTTACTATTATTTTTA
Long Flanking Sequence:
TTAGACCATTAGCATTTTGTTAAACAATTGAGTTTTACCAATTCTGAATCCATGCAGCCGATCTCCAGCTCTGACTGTAGCACTTTTAGCTTAGCCTAGCATAAATCATTGAATTGGATTAGACCATTAGCATCTTGTTTAAAAAATAATCCTATTTTTTAGCTTTCATGTTAATTTCAGTAATATGGAGTACTTTTAGCTTAGCTTAGCATAAATCATTGAATCGGATTAGACCAATAGCATCTTGTTTTAAAAAAAACAAACTCTTGCTGCCTGGTAGCAACCCTGTGTTTGTGGACCCATGTCTTAGTCCTCCTTTAATCCTCCTTTCCTCTGTTGTGTTTGTCAGGCTGCTGGAGGGAATGGTCCGTAAGCTGAACAATCTCCTGGAGCGTCTTCATCAGTCATATTTCTTTTACTTGTTGCCTTCTCTGTCTCGGTTTGTCTCCATCGGCTACTACATGCCAGCGTTTGGCCTGCTGGCGGTCATCTTACTGCTC[C/T]GAGTATCCATTTCAGTCCAACTGTGTTTACCTTCTTTACTATTATTTTTAGGATTCTTCAAGTTTGTGTAATTTACAGATTTAATCAGACAGATGGAGGATTCGTTTCCAAGTGTCTTCATTATAAGGCTTAAGTAGTGAGTTTGCTAATGAGACATTACCTTCCCACATGAAAAAATACTATATTGATTTAACGCAAACACTGTAGTCTTATTGAACCAAGTGTATTATGCTGCGTATACTGTAGTATTTCTAACACTTTAAATTATGCTACAGCATTCTGTGATACTAGCTGTAGGAAGTGAAATAAATACTGTAGTATACGTTAGATTTACTGTTGTAAACTGGTTTATTGTTGTGTAATATACCCTATAATCATAGAGCAATACGTTATTGATTCATTTGTTTACATTACTATAGTTGTGTTACCATAGCAACTGTAGAATCACCACCACAGATCAATTACTATAGTCGTTGTTACCCTAGCAACTGTAGTTGCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2042
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114431 Nonsense 605 615 12 12
Genomic Location (Zv9):
Chromosome 2 (position 2472997)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 2340649
GRCz11 2 1453067
KASP Assay ID:
554-2785.1 (used for ordering genotyping assays)
KASP Sequence:
TACGGGTCGCTCGTCTATCCGCTTTTAGCGCTGTTCGTTTATCCCTGCTG[G/A]CTGATGTTCTGGAATATTCTCTTCTGGAAGTAAACAAGTGAAAGAGCAAA
Long Flanking Sequence:
AACCCCAAACCATGATTTCTCCTTCACCAAACTTGACTGATGTCTGTGAGAATCTTGTGTCCATGCTGGTTCCAGTAGGTCTTCTGCAGTGTTGATGATTGGGATGCAGATCAGCAGACGATCCAGCAGAGAAATCCACCTTCTGACACTTCTCCAAGTGATCAACTAGAAGTCGAGTTATTATTTGTTGCTCTTACAACTCGGATCGACAATCACCATTTACAGTTTTGATCAAAATATTAGTGATCAGTACTATCTCTAATCTGCACGTCTCCTGTTGTGTGTGTCAGATCTGTGAGCGCTCTGGCCATGGTGCTCCTCAGTCCAGCGTTCACCATCTTCTACTGCGTCCTCATCTATCAGGAGCTGATGGAGGCGCCGGTCAGCCTTCCTGAGGGACTCACGATCTTCCTCTCCGTCATTTCTCAGGGAATCCTCGATCACGCGCTCTACGGGTCGCTCGTCTATCCGCTTTTAGCGCTGTTCGTTTATCCCTGCTG[G/A]CTGATGTTCTGGAATATTCTCTTCTGGAAGTAAACAAGTGAAAGAGCAAAAATGATCCAAAATGATCAGACTCTTAAAGGTTTGTTGTCTTTCTGCACTGCAAAATTGCCTTCTTTCCTAGAGTTTTGGTCTGGTTTCTAGTCTAAATGTCTGAACATTCACAAATTAAGAAGCGTTTTCTTGACAACTACAAAATATTGTCTTGTTTTGAGAAATAATGAGTCAAAATTAAGTGAGTTTCTCCTTAAAGCAAGCAAAATAATCTGAATATCGGGGAGGAAAATAATATAATGTCACAAGGAAAAACATGATTATTTTACTCCCCCCATTGGCAGGTTATTTTGCTTATTTTAAGTAAAACTCACTTATTTTTAACTCATTATTTCTTTAAACAAGACAATATTTATTATTTGTCTAAGAAAATACTTCTCAATTTATGCATTTTTAGATATTTAGACTAGAAACAAGACAAACACTGCAGGTAAGAACAGTATTTACTT
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 swim bladder
ZFA:0000076		 aplastic
PATO:0001483		 abnormal
PATO:0000460