Busch Lab

ZMP

slco1f4

Ensembl ID:
ENSDARG00000045469
ZFIN ID:
ZDB-GENE-070112-2172
Description:
solute carrier organic anion transporter family, member 1F4 [Source:RefSeq peptide;Acc:NP_001074135
Human Orthologue:
SLCO1C1
Human Description:
solute carrier organic anion transporter family, member 1C1 [Source:HGNC Symbol;Acc:13819]
Mouse Orthologue:
Slco1c1
Mouse Description:
solute carrier organic anion transporter family, member 1c1 Gene [Source:MGI Symbol;Acc:MGI:1889679]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa40338 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa18792 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa10903 Essential Splice Site Available for shipment Available now
sa6052 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa20314 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa40338
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084603 Essential Splice Site 132 571 6 15
Genomic Location (Zv9):
Chromosome 4 (position 60484751)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 70649738
GRCz11 4 72165831
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCATTCATAGATGATTATGCACGGCCAGAAAACTCTGCTTTTTACATTG[G/A]TGAGAGGATTGTTATTGTTATTAATAATATTAGTACTTTCATTGTGATTT
Long Flanking Sequence:
CCTTATGGGCCGGTGAGTTTTGAATAAAGTAAGGCATACTCATGCTTGGTGTATTCACATTAAGGAGTTAACGAAGTTCCACTCTTTAAAAGTGTGCTTTCTTAAGGTTCTATATTTAAAAATACAGTATGTTCTATTTATGTGTCTACTTATTTTCTAACAGGTACAAGTATGGTACAGCTGCCACCCACACTAATGATGCTGGTAATTTTACTGTGATCTCTACATGCTCATCCGACTCTCAGGAAACTCTTCAACAGCCTTTCTCTGGTAATGCGTTATGTGTAGAGAAGCATATGGGATATTTTAATTGTAAAATGCAATACATGCTGTATTGGGTTGTCTAGGATGCCAAAAAGAGGAAGCTGAAAGCTCACCCTTCTGGGTGATAGTGGTTTTGGGAAACACTATGCGTGGGATTGGGGAAGCCAGCATTGTCCCTCTGGGAATGTCATTCATAGATGATTATGCACGGCCAGAAAACTCTGCTTTTTACATTG[G/A]TGAGAGGATTGTTATTGTTATTAATAATATTAGTACTTTCATTGTGATTTGATTCATTTTCTTCCTTTTCTGTAGGTTGTCTGAACACACTCAAAGGGATTGGGCCGATTTTTGGTTACATGCTTGGATCTCTATGTGCTAATCTTTATGTGGATTTTGGCTTAGTGGATCAAGGTTAGATAAATACTTATATATATTTACCTTAGATCTTAATAACAAAAAATAATAAAAAAGGTCAATATTGGTTGGAAATCTACCAGGGTATTGACCTTATTCTAAAATGCGGAAGTGCGCCTGTTTTCACGATTGTCTTAGAACTTCCGATTCAGTCGCCTATGGAAGAAATGACTAGGAATAATAAACGGCAGAAAACGGTCAAACTACTTGCTCAACAAACAAATGTTTGCATGACTACACAGACCAAGTAGCATATTATAATAAGAAAATATTAAATTTCAACATCAAGCAGCGTAACGAGCAGTTGTTAACGTCAAAAAATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18792
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084603 Essential Splice Site 234 571 9 15
ENSDART00000084603 Essential Splice Site 234 571 9 15
Genomic Location (Zv9):
Chromosome 4 (position 60487371)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 70647118
GRCz11 4 72163211
KASP Assay ID:
2259-5221.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATTAAAAAAAATCTGATTGTTTAAAAAGTGTGCTATATTCTTGTTTTCT[A/T]GATTTTGCACCAACTTTTAAGCGTCTGCTCACCAATAAGATCTACATTCT
Long Flanking Sequence:
GTTGTCTCAATCTAACACAACCACATTCCCGGAGGGCCACCAGCATGTATCATTTGTCTGTCTTGCAGGATGGGTTTCAGGTCTGCTAATGTGCTGATGATCTAAATAAGGTGTGTTTTGTTAAGGAGACATGGAAAATGTGCAGTGCTGCTGGTTCTTTAGAACTGTGGTTGAGAACCACTGAGCTAACTGATCAATTTATTTGCATATTCTCTTCTCAGAAAGCGTGACCATCACACCGCAGGACTCTCGCTGGGTTGGGGCTTGGTGGTTGGGTTATGTGGTGTCTGGCTTGTTGACTCTCCTCGCTGCTTTTCCTTTCTGGTTCTTGCCGAAAGTTCTACCTGAAAACTCCCAAATCTCACTGCTAGACAACACCCCACAACAGCACAAAACCACCCCCAGCCTTACAGAGATAGTCAAAGGTAAGGAATGGCAACATTGAAAAGACATTAAAAAAAATCTGATTGTTTAAAAAGTGTGCTATATTCTTGTTTTCT[A/T]GATTTTGCACCAACTTTTAAGCGTCTGCTCACCAATAAGATCTACATTCTGTACCTGGCGTACAGTATAGTGGCATTCAACGACTTCGCCATAGTTGCAACATACACGCCAAAGTATCTGGAACAGCAGTTTGGGCAAAGTGCATCCAAAGCCAACTTTCTGATAGGTGACAACTGTGATGTTGCTAGAATTTTCCTGTATTTCCAGTCTGTTTTAACTGGTTGCATATTTGTACACTGTACATAGGAGTGACATCTATTCCGGCAGTAGCGCTGGGTGTTTTCCTCAGTGGGTTGATGATGAAGAGGTTTAAATGGGGTCTGCTGGCATCCGCAAGAGTGAATTTGTTGACCATAGTCGCCACAGTGTTTTTGGCCGTACCTTTCTTCGCTCTCAGCTGTGAAAATCTAGATATCGCTGGGGTTACAGTGCCCTATCAAGGGTACTATTATCTCCATCTCTTCAATCTAATAACTTTCAAGTCACTTGTACGCTGTAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10903
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084603 Essential Splice Site 234 571 9 15
ENSDART00000084603 Essential Splice Site 234 571 9 15
Genomic Location (Zv9):
Chromosome 4 (position 60487371)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 70647118
GRCz11 4 72163211
KASP Assay ID:
2259-5221.1 (used for ordering genotyping assays)
KASP Sequence:
CATWNAAAAAAAATCYRATTGTTTAAAAAGTGWGCTATDTTCTTGTTTTCT[A/T]GATTTTGCACCAACTTTTAAGCGYCTGCTSACCAATAAGRTCTACATTCT
Long Flanking Sequence:
GTTGTCTCAATCTAACACAACCACATTCCCGGAGGGCCACCAGCATGTATCATTTGTCTGTCTTGCAGGATGGGTTTCAGGTCTGCTAATGTGCTGATGATCTAAATAAGGTGTGTTTTGTTAAGGAGACATGGAAAATGTGCAGTGCTGCTGGTTCTTTAGAACTGTGGTTGAGAACCACTGAGCTAACTGATCAATTTATTTGCATATTCTCTTCTCAGAAAGCGTGACCATCACACCGCAGGACTCTCGCTGGGTTGGGGCTTGGTGGTTGGGTTATGTGGTGTCTGGCTTGTTGACTCTCCTCGCTGCTTTTCCTTTCTGGTTCTTGCCGAAAGTTCTACCTGAAAACTCCCAAATCTCACTGCTAGACAACACCCCACAACAGCACAAAACCACCCCCAGCCTTACAGAGATAGTCAAAGGTAAGGAATGGCAACATTGAAAAGACATTAAAAAAAATCTGATTGTTTAAAAAGTGTGCTATATTCTTGTTTTCT[A/T]GATTTTGCACCAACTTTTAAGCGTCTGCTCACCAATAAGATCTACATTCTGTACCTGGCGTACAGTATAGTGGCATTCAACGACTTCGCCATAGTTGCAACATACACGCCAAAGTATCTGGAACAGCAGTTTGGGCAAAGTGCATCCAAAGCCAACTTTCTGATAGGTGACAACTGTGATGTTGCTAGAATTTTCCTGTATTTCCAGTCTGTTTTAACTGGTTGCATATTTGTACACTGTACATAGGAGTGACATCTATTCCGGCAGTAGCGCTGGGTGTTTTCCTCAGTGGGTTGATGATGAAGAGGTTTAAATGGGGTCTGCTGGCATCCGCAAGAGTGAATTTGTTGACCATAGTCGCCACAGTGTTTTTGGCCGTACCTTTCTTCGCTCTCAGCTGTGAAAATCTAGATATCGCTGGGGTTACAGTGCCCTATCAAGGGTACTATTATCTCCATCTCTTCAATCTAATAACTTTCAAGTCACTTGTACGCTGTAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6052
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084603 Essential Splice Site 471 571 13 15
Genomic Location (Zv9):
Chromosome 4 (position 60489614)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 70644875
GRCz11 4 72160968
KASP Assay ID:
554-3920.1 (used for ordering genotyping assays)
KASP Sequence:
TTTGTTGCMAAAAGTTTACATCAAAATGCGTACTGAGAACATGTTCTTGC[A/T]GGATTGTGRATCCTGAGCTGAAGTCTCTCTCTGTGGGAATGTTACTGTTA
Long Flanking Sequence:
CTCTTTGTACATCCGAATTGTTGTAAAACTGAGCGCACGTGCACAAGGGCAAAACTCCTTCCTGCCTCCTCCCCATATTAAATATGGTAATGACTCTGTTAGGACATGGTAGCCGTGTTATCCCGGGCTGCTTCAGCCGCAGGACTGGAGATGGCTTGTCTGCTACGAGACGGTGTAGTTCCAATGAAGGGGAACGTCCTGGCTACAAACGTAACCCATGTTCCCTGAATAGAGAACGGAGATGTGCAGCTGGCCAAATTCTGATGCACAACCTAGAACTCTGACATGGACATGTTGTTAGTTTAAATAACAAAGGATAGACCTGTTCTGTCGGAAGAGAACCTTAAATGATTTCTGTTATGAGCTGATGCTCTTTAATAAATAAAATTAAACCCTACCCACAATGCAAAGGCCAAAAAAAGAGCAATCTAACATAAAGCTACATATCGATTTGTTGCCAAAAGTTTACATCAAAATGCGTACTGAGAACATGTTCTTGC[A/T]GGATTGTGGATCCTGAGCTGAAGTCTCTCTCTGTGGGAATGTTACTGTTAGCTGTAAGAGTTTTGGGTGAGTTTGTAAGGTGTAATATTTATGTTTTTATTTTCTTGGCCTTACAGCATTGTTTACAATGCAATTGACCTTTTTTTAAAGGTGGTATTCCTGCTCCCATTTACTTTGGTGCTCTTATTGACTCGACCTGTCTGAAATGGGGCCAGAATAAATCGTGTGGAAGAGGTGCCTGCAGAATCTATGACATCGAGACGTTCAGGTGAGCTGAACTATTATATTTACCCTATTCTGTTCGAAATAATTTGAATGTACCAAAGCTCTAATTCAAACTGAACTATTTTTGACCCCCATAAGGTTCCTCTTTCAGGGGCTGACCATGTGTCTTCGAGTATTAGCCTGTTCCCTGCTTTGGATAGCCACCATAGAGATAAAGAGAAAAAATACTGAACAACAAACAAATGTCTCAAGACACTGAACTCCAAATGCCTTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20314
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084603 Nonsense 564 571 15 15
Genomic Location (Zv9):
Chromosome 4 (position 60490072)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 70644417
GRCz11 4 72160510
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTCCCTGCTTTGGATAGCCACCATAGAGATAAAGAGAAAAAATACTGAA[C/T]AACAAACAAATGTCTCAAGACACTGAACTCCAAATGCCTTTGTGCGATCC
Long Flanking Sequence:
CAAAAGTTTACATCAAAATGCGTACTGAGAACATGTTCTTGCAGGATTGTGGATCCTGAGCTGAAGTCTCTCTCTGTGGGAATGTTACTGTTAGCTGTAAGAGTTTTGGGTGAGTTTGTAAGGTGTAATATTTATGTTTTTATTTTCTTGGCCTTACAGCATTGTTTACAATGCAATTGACCTTTTTTTAAAGGTGGTATTCCTGCTCCCATTTACTTTGGTGCTCTTATTGACTCGACCTGTCTGAAATGGGGCCAGAATAAATCGTGTGGAAGAGGTGCCTGCAGAATCTATGACATCGAGACGTTCAGGTGAGCTGAACTATTATATTTACCCTATTCTGTTCGAAATAATTTGAATGTACCAAAGCTCTAATTCAAACTGAACTATTTTTGACCCCCATAAGGTTCCTCTTTCAGGGGCTGACCATGTGTCTTCGAGTATTAGCCTGTTCCCTGCTTTGGATAGCCACCATAGAGATAAAGAGAAAAAATACTGAA[C/T]AACAAACAAATGTCTCAAGACACTGAACTCCAAATGCCTTTGTGCGATCCAGAAATTCAGAAGACAACAAAGTATTGTTCTGTGGTGTTTTATTTTTTAAGTGCACTTCATGTATATGTATATTCTACTTTTCTCTTTTCAATATTATCAGTGTGAAATGCACTAGTATATGCAACGTTTAGATAATAAATAAACTGTTTAATTGTGCATGTGGATTTCCCACGAAAAAAGAAATTTCATTGTCAAGAGTCATTGCATCGTAATGCATGGTAAGGGGGTGGGGGTGGTAGTCTTAGGATGATTCTAAGGGCTCACACCATTTTGGGGCCCCCAGAGTTACTAGTTATCTTAGGGCTTGGTAATGAAAATTCCTGTGAGTCACGCAACAGTCTGTTTTGTGTTCTGATTGGCCTTACATTGGCCTGTTTTAAATTCACAGAATTCCCATGAGAATGACAAAATAATTGCATTTGAGCCATTTGATACATGAAATCTAAATG
Associated Phenotype:
Not determined