Busch Lab

ZMP

kdm4b

Ensembl ID:
ENSDARG00000042729
ZFIN ID:
ZDB-GENE-060503-664
Description:
lysine-specific demethylase 4B [Source:RefSeq peptide;Acc:NP_001076274]
Human Orthologue:
KDM4B
Human Description:
lysine (K)-specific demethylase 4B [Source:HGNC Symbol;Acc:29136]
Mouse Orthologue:
Kdm4b
Mouse Description:
lysine (K)-specific demethylase 4B Gene [Source:MGI Symbol;Acc:MGI:2442355]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa44979 Nonsense Mutation detected in F1 DNA Not yet available
sa15777 Essential Splice Site Available for shipment Available now
sa17996 Nonsense Available for shipment Available now
sa10758 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa44979
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034084 Nonsense 165 1134 2 21
ENSDART00000128161 Nonsense 165 1134 3 22
Genomic Location (Zv9):
Chromosome 22 (position 3899192)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 3944309
GRCz11 22 4397157
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCCTGCTCCCATCATGCAAGTGGTGACCGGCCAATCTGGGCTCTTCACA[C/T]AGTACAACATCCAGAAGAAGTCCATGACCGTTGGAGAATATCGCAAACTG
Long Flanking Sequence:
ATTTTACACTACTGCAGAAATGTTGCGTCGCGTGTTGTTATAAATCCCTCAGCATCAACTTTTATTAATATTCATGAGGTTTAATATTTATTCATTTGATTTTTAACCTGTCTATTTCGTTGGGAGATTGTTGGTATTGTTTTATTTGGTATTTAAAAGTTTCTGTCACGTTGCGTCTGGTGCGGACAAACAATTGAATTATTACTGGAATATTGTTGGAATATATCAAGTTATGCTGTGTGCGGTACTATACTGAATCATAATGCTCAGTCCAAACAAGTCATATAAAATATCATGCAGGGACTTGAACGAATGAGCGATCTTTTGACTGACTGTATATTTACTTTTATGTTTATGTTTTCTTCGTTCTCTCGTCTTGCGATGCTCAGGTTATTCCGCCGAAGGAGTGGAAACCGCGCCGTTCCTACGAGACCATCGAGGATATGGTCATTCCTGCTCCCATCATGCAAGTGGTGACCGGCCAATCTGGGCTCTTCACA[C/T]AGTACAACATCCAGAAGAAGTCCATGACCGTTGGAGAATATCGCAAACTGGCCAACAGTAAAAAGTACGGTTTACACTTGCATTTCTTTTACCTTTATTTCTAAATGTAAACAATAAAGTCCCTTATAGGATCACTTCACCTCACTTTATATTGAAAAGAGCTCATTTTACAACTCTCCACAAGTTAAAGAGGGAAGGTTTATCGTTTTTGACTCCATTGAGCCGATCTCTAGGGAGTACTATTATAATTAGAAATAAAATAAAATTTTTAGCTTAGCATAGTTCATTGAATCAGGTTAGACCATTAGCATCTCACTCAAAAATGACCAGAGTTTTGTAAATTTTTCTATTTAAAGCTTGAGTTTCTGTAGTTACACTGTGTAGACGGACTGAAAATGATAAAGTAGCTAATAAGTAATAAAAAAAACACTTTTTGCTTAGCTTAGCATAGTTCATTGAATCAGATTAGACCATTAGCATCTTACTCGTCAATGACCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15777
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034084 Essential Splice Site 306 1134 5 21
ENSDART00000128161 Essential Splice Site 306 1134 6 22
Genomic Location (Zv9):
Chromosome 22 (position 3922489)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 3921012
GRCz11 22 4373860
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGCCATTCCTCCCGAGCACGGCAAGAGGCTGGARAGGCTGGCGCAAGG[T/C]AAGACCTCACATCCGTTTGTTATCGTGTCTTCAAGCTRAAAYGAAACCTC
Long Flanking Sequence:
CAATGTCAATAACAACGTCAAGCGAATTGAACCCTTCAGTAAAGCGCACCCCACACCAAAATCATTGCAAATTTAAAGCAGCACCGTCTGCAATTTGGGCTGGAAAATTATTAGCGCGCATGTTTGAGCCGATTAGGCAAAATGAATTGGCTGGCGCGCTGTAATTTTCCAGGCTTTGTCTTAGTGACATTTGAGCACTTTTGTCTTTAAAGCAGCGTGTGACTGCTGAATGTGAAATAGGGGTGAAATTTGTGCTTTTGTGTGTTTCCCGGAGCAAAGAAACGGCTGTGTTTTATGTTTTCGGAGGGCTGCAGAAGAAGCCTGTGATGATCAGAGGCTGCTTCTCTCAGAGGCGTCTCGCTGCGCGTCCCTCCAGTGTCTTTCTCTCTCCTCTTTTCTATTGATCCCATTAATTGATCTAGTTTTTTTTTTCCTCCTCTTCACCGCAGGTATGCCATTCCTCCCGAGCACGGCAAGAGGCTGGAGAGGCTGGCGCAAGG[T/C]AAGACCTCACATCCGTTTGTTATCGTGTCTTCAAGCTGAAACGAAACCTCGTGCCTCAGCCGATTTAAAAACTGAGCTCATTTACATACACGAGTCTTGAAGCTGTGCCTGAAGAAGTGAGAATAAATCTTGTACCAATTAACTTGCTTGCAAGAACTTGAGATATTTCACTAAATGTTCAAGCTGCTCCCTTGGCATTGGCTAAAATGGGAAAAAATGCAGTTTAAATGCAGCACACTGACCGGCCACTTTATTAGGTACATCTGACTACTACCGCGTTGGTCCCCCTTTTGCCTTCAGAACTGCCTCAATCCTTGGTGGCATAGATTTAACAAGGTACTGAATATATTCCTCAGAGATTTTGCTCCATATTGACATGATAGCATCAAGCAGTTGCTGCAGATTTGTCGGCTGCACATTCATGATGTGAATCTCCCGTTCCACCAGAACCCAAATGTGCTCTATTGGATTGAGATCTGGTGACTGCGGAGGTCGTTTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17996
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034084 Nonsense 579 1134 10 21
ENSDART00000128161 Nonsense 579 1134 11 22
Genomic Location (Zv9):
Chromosome 22 (position 3946158)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 3897343
GRCz11 22 4350191
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTTCCAGGAAGTGTTTGAGCAGWTCACCACCGCCAGCGAAATGCAGAAC[C/T]AGAGCAATGGAGCTGCCCCTCTGCAGGTGAGGAGACTCNTTYCTATCTTTT
Long Flanking Sequence:
ATCCAGAACAGGTTAAGGCTGGGTAGTCAGCATTGGTTGGCCATTTCAACAATCAACAACCCCTTTAGTAACCAATTCTCTACCCAGAGCACCAAAGCAACCAATATTTCAGTTGCTTGACAACAACACTAAATACCCTAGCAACCATCCAAAACATCTTAAGGCCTGGTAGTCAGCATTGGTCAGCCATTGCAACCTTCAACCTCTTGGTAACCAATTCTCTACCCATCAGCCAACTAAATTAACCTAGCAATGACATAGCAATCTACAAATCTCAGAACACATTAGCAACCAAAAGCCTAGCAACAAGCCAAGACTGTGTTTTGATCCTATTTCCTGTCATTTCTTTATCAGTTGAAGAAATAAAAGCCGATTTCCAGGATCCTCCAGTGGAGAACGGAGAAAAGAAGAAGAAAAAGAAGAAAAAGCTTCAACTCACAGATGAAATGTCCTTCCAGGAAGTGTTTGAGCAGTTCACCACCGCCAGCGAAATGCAGAAC[C/T]AGAGCAATGGAGCTGCCCCTCTGCAGGTGAGGAGACTCTTTCTATCTTTTCTTTGTATGATTATTAGTAGATTGATACACATATATAATATTTCATTAAATTATTTTTAGACAAATCCGTTCACGAAGCTGAAGAAGAAGGTTGAGGTGAAGAAGAGCCGAAGGCATCCAATCAGCAAACCGCCGATGCGTTCGCCTCACTCCATCGTCAAACAGGAGGCCTCCAGCGATGAGGGTAAATACTGCTTGTATTACATTTATATCGGAATGTTTGTTTGTAAACCATTTCATTAATTGTTGTGCTAAATTAAGTGTTTTACGTAAGAATACATTCAAAAAATGGCCTTAAAATCGAATATTTCATACACGCGTTACCTAAGTAATCCTTGTTTTTGTTTGTAAAACCATTTTATTGTTACGTTATTTTATTTGTTTAAAGTCCATTTTTATTTTAAAGATGTCCTGAAAAACAAATATCATACACAGAAGTCTCTAAAACTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10758
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034084 Nonsense 665 1134 12 21
ENSDART00000128161 Nonsense 665 1134 13 22
Genomic Location (Zv9):
Chromosome 22 (position 3951102)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 3892399
GRCz11 22 4345247
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGACAGCGACCTGTGGCAGAACCGTTCKCCGAACTTCCTAGCCGAGAAA[C/T]AGTTCAACGCGGCCATGTCCACCATTGAGCCGTACTGCGCCATCTGCACG
Long Flanking Sequence:
TTTAGTAGTTTCATCTGTCCGTCCATTCACCATCCATCCATTATACCATCTACCATTTATCAATCCATCCATTTTTTTAGTAGTTCATCCATTGTTTTTCATATTCCATCTATCCTTTGATTTATCTATCCATCCATCCATCAATCCATCCATTTTTTTTTTGGTAATTTCATCGATGCATCCATCCATCCTTTTTTTTGGTAGTTTTCTCTGTCCATCCATTCACCATTCACCATTCATCCATCCATTCATCAATCCATCTATTTTTTTGGTAGTTTCTATTCATTTTCCATTCAGTTTTTTTCCCTCCATTGTAGCATGTGTCACTTCTGAATTGTGTAAATTACAGTAAAACTCACATGTGTCTTTATGGCTTCTCTGTGTGATATGCAGAGCTCTACTCAGGGCTGCCAGTAGGTGGCGGTGTCACTCACGAAAGCAAGAAGCCCGAAGACAGCGACCTGTGGCAGAACCGTTCGCCGAACTTCCTAGCCGAGAAA[C/T]AGTTCAACGCGGCCATGTCCACCATTGAGCCGTACTGCGCCATCTGCACGCTCTTCTGCCCGTACACACAGGTAACGCATTGCATATGTAAAATACATGCATAAACAGGATCACTATTTCACTCCCAAATGGGTTCACACACAGACACACATAACATATGGCATCATTAATAAAGTGCTTTTGGCTTCTTATTTGCATTATTTCATGCACGTTATATTCAATTATATTAAATGTTGATTAAATTCAAGTCAAGTTGAGCTTTATTGTCATTCTGCTACATGTGCGGACATGAAAGAAGAAAGGAGGGGGAATTATATTATAAAAAATATTGTAGGAAATACTGTGAAGAAGTCCTTGCTCTGATATAATTTGAAACTAAATAGCAGTTAATGAATAAACAAATAAACTCTCTTTTTGTGTATTTTCAGTCTGTGAAGGACCCCTTCCACATCTCGGACATGTCTGGTCTGGTGTCGCGGGTCGGCTGCCGCACTCGTCCG
Associated Phenotype:
Not determined