ZMP
si:dkey-21n8.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
SDK1
Human Description:
sidekick homolog 1, cell adhesion molecule (chicken) [Source:HGNC Symbol;Acc:19307]
Mouse Orthologue:
Sdk1
Mouse Description:
sidekick homolog 1 (chicken) Gene [Source:MGI Symbol;Acc:MGI:2444413]
Alleles
There are 13 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20103 | Nonsense | Available for shipment | Available now |
| sa11116 | Nonsense | Available for shipment | Available now |
| sa20102 | Essential Splice Site | Available for shipment | Available now |
| sa10466 | Nonsense | Available for shipment | Available now |
| sa10734 | Essential Splice Site | Available for shipment | Available now |
| sa1775 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20103
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111856 | Nonsense | 31 | 2090 | 2 | 44 |
| ENSDART00000144088 | None | None | 518 | None | 10 |
Genomic Location (Zv9):
Chromosome 3 (position 41281992)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 41145352 |
| GRCz11 | 3 | 41287210 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCCAGGATGTGAATTGAAGTTGTTGTTTCTCTTTTTATACTCTTAGGTA[C/A]ACCATTTCCTCTCTCCAGCGCTCCAATATGGGTGTTTATCAGTGTGTGGT
Long Flanking Sequence:
ATATTTCATCACTCTCAGAGCTGCCACGGTATTGCTATTGAGTTTCTGTGAAGGAGGAAAACCACCAACGAGATGCACAAACCCGCCGTCTGGCATTTTCAAAGACGTAAACAGATTCTGCTAAGTAGAGAGCGACGGCGCATTAGTCATGTATTCAGCGTATTCGGAAATGCCAACAGATTTTAATGCTCAAACGTTTGCCACCTTTGCTTTTGGTCAAAGTGGCCTTTTGGCTGAAATCTGATATCCGTCATAATGGCTGGGCTTGGAGAGGAGTTCCTGTTGAGCCATTTTGATGTGCTCCCTTCGCGCTAATGTGCGAGCTGGCAAAAAAAAGCAGAGTCGTGACTGCAAGGGTAAACCTTTTAAACCCAACCTCTCTAAATGGGAGCACATTTGAGTCGAAAATCCTTGAGTTTGTTGGCAAATAGCTGTTGTTTTTTTTTACCATTCCAGGATGTGAATTGAAGTTGTTGTTTCTCTTTTTATACTCTTAGGTA[C/A]ACCATTTCCTCTCTCCAGCGCTCCAATATGGGTGTTTATCAGTGTGTGGTGAGAAACAGGATGGGCGCTCTGCTTCAGAAAAAAGCCGAGATACAAGTGGCATGTGAGTTCATGATTCATCACGAATAAGATTGATCTGGTTGTTGAGTCAACTTATTGATTGAAGGATTGCAGGATTTACTAGTTATGCTATTCTAACTCATAATTTAAGATTTGCTAGAATTTTCTGCATTTTTTAAAGTCTTACTCTTACCATTGCTGCATTTATTTGATCTAAAACTGTAAAAATGTGACATTAATGCAATTCAGAGCAATTAAGTGACTTAACTACTAGATATTTACATAAATTAATAGGTACTTATTGTGTTGTGTTGCACAACACAAAGTGCTATTGATGTGGGATATGGGTAAGATTAGGGGCAGGTTTGGTGGTGTGAGTGTGTTTAAAGGTTGATTAAGATGTTAGGATTGGGTCAATAAGTGTAATTATGTAATTACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11116
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111856 | Nonsense | 834 | 2090 | 18 | 44 |
| ENSDART00000144088 | None | None | 518 | None | 10 |
Genomic Location (Zv9):
Chromosome 3 (position 41086840)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40950200 |
| GRCz11 | 3 | 41092058 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTTCAGCTGGTACTTGACGTCAGTGCTGTGCTTCACCACACCAGGGAAC[G/T]GACCCCGCAGTSCCCCCAAAYTAGTGCAGACTTTCGAGGACAGTAAGTTA
Long Flanking Sequence:
ACTAATAAAATCATTTCATGGATAATATCGATGTGATATTTTAAAATTTGTTTCTTTTACTTGATTAGGAATTATATATTATATATCTGACCATATTTTTTGGCTTAGACATGAGTCTAACGTACAGCATGTTTTTGCCTGCAGTTCCTACAGCGCCCCCACAGGGAGTGGAGGCTAAAGCAGTGAACTCAACCACCATTGAATTTTCCTGGAATCCACCGCCTCAACAGTTCATCAATGGCATTAATCAAGGTTACAAGGTAAACCCCTTTCTCCTCCTCTACTAATTCCCATAGCATCAAAATACAGAACTTATAATGTATTTTGTGTCCATGAATGTCTCTCAGCTGATGGCATGGCCTGAACGCTCTCCAGAGGAGGTTATCGTGGTGACCATTACCCCTGATTACCATGGTACACGTCACCTCGGGTACATCAGTGGCCTGAGGAAGTTCAGCTGGTACTTGACGTCAGTGCTGTGCTTCACCACACCAGGGAAC[G/T]GACCCCGCAGTCCCCCCAAACTAGTGCAGACTTTCGAGGACAGTAAGTTAAAGTCATAAGGTTGGGTTTCTTTCTCTGACTGAATTTTATTATTTAATAAAATGGCTGCTCAGAATATGATTGATTGGATTTACATACAATTGGCGCTAGTCATTTATCTGCCCTATGAATAAATGTGCAAAAACACAATGACCCCTATTTATGATGAAAGAGTATCAAAGCATCAAAATCAGACCTGGACATTTTACAGCCGACGGGTCACATGCAGCCTCCTGGACTTCTTTGATCGGCCCAAGTGAAGTACAGTTGAAGTCAGAATTATTAGCCCCCCTTTGAATTTCCTTTCTTTTTTAAATATTTCCTAAATGATGTTTAACAGAGCAAGGACATTTTCACAGTATGCCTGATAACATTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTTGGATAGAATTAAAGCAGTTTTTAATTTTTTAAAAACCATGTTAAGGTCAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20102
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111856 | Essential Splice Site | 847 | 2090 | 18 | 44 |
| ENSDART00000144088 | None | None | 518 | None | 10 |
Genomic Location (Zv9):
Chromosome 3 (position 41086797)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40950157 |
| GRCz11 | 3 | 41092015 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGAACGGACCCCGCAGTCCCCCCAAACTAGTGCAGACTTTCGAGGACA[G/A]TAAGTTAAAGTCATAAGGTTGGGTTTCTTTCTCTGACTGAATTTTATTAT
Long Flanking Sequence:
AAATTTGTTTCTTTTACTTGATTAGGAATTATATATTATATATCTGACCATATTTTTTGGCTTAGACATGAGTCTAACGTACAGCATGTTTTTGCCTGCAGTTCCTACAGCGCCCCCACAGGGAGTGGAGGCTAAAGCAGTGAACTCAACCACCATTGAATTTTCCTGGAATCCACCGCCTCAACAGTTCATCAATGGCATTAATCAAGGTTACAAGGTAAACCCCTTTCTCCTCCTCTACTAATTCCCATAGCATCAAAATACAGAACTTATAATGTATTTTGTGTCCATGAATGTCTCTCAGCTGATGGCATGGCCTGAACGCTCTCCAGAGGAGGTTATCGTGGTGACCATTACCCCTGATTACCATGGTACACGTCACCTCGGGTACATCAGTGGCCTGAGGAAGTTCAGCTGGTACTTGACGTCAGTGCTGTGCTTCACCACACCAGGGAACGGACCCCGCAGTCCCCCCAAACTAGTGCAGACTTTCGAGGACA[G/A]TAAGTTAAAGTCATAAGGTTGGGTTTCTTTCTCTGACTGAATTTTATTATTTAATAAAATGGCTGCTCAGAATATGATTGATTGGATTTACATACAATTGGCGCTAGTCATTTATCTGCCCTATGAATAAATGTGCAAAAACACAATGACCCCTATTTATGATGAAAGAGTATCAAAGCATCAAAATCAGACCTGGACATTTTACAGCCGACGGGTCACATGCAGCCTCCTGGACTTCTTTGATCGGCCCAAGTGAAGTACAGTTGAAGTCAGAATTATTAGCCCCCCTTTGAATTTCCTTTCTTTTTTAAATATTTCCTAAATGATGTTTAACAGAGCAAGGACATTTTCACAGTATGCCTGATAACATTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTTGGATAGAATTAAAGCAGTTTTTAATTTTTTAAAAACCATGTTAAGGTCAAAATTATTCGCCCCTTTTAGCTATATATTTTTGATAGTCTACAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10466
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111856 | Nonsense | 957 | 2090 | 21 | 44 |
| ENSDART00000144088 | None | None | 518 | None | 10 |
Genomic Location (Zv9):
Chromosome 3 (position 41079208)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40942568 |
| GRCz11 | 3 | 41084426 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTCCTTCAATGCAGAGCTTCCCGGGCCTCCCTCSAATCYGGTTATTTCC[A/T]AGATCAGTTCACGATCTGCTACGCTCAAGTTCCGCGCAGGGGATGATGGG
Long Flanking Sequence:
TTTCTCTGGCTGAAAGCAGGCAAATGCTGAACTGGCTGAACGCCAAGCCAAAACCATAATGCCTGCTGATAAATTGCATATTGTGAGACATTAGGGAAACAGACGTCTACACGTCTCAGTGGGGATTTCGGGCAGATGCGAGACTATCGTCTGTTATTTGATTTAATTCCAGTGTAATTTCATCAAAGGTTTCTCACACCAAATGAGACTTTTTATCTCTACACTTCAAAAGCATCGCAAATCTCTTTTTTTTCCCTACTCGGTCCCTTGTGAATCACTGTGTTATTAAAAATATTCCGGTCATGATTTAGAAATGTTGGATGTTATTGACTTTAGAAGGCATGCTTGTGGATGTTTTGTGTTTATTGATTGTTGGGATGTGCGGATGTTGTTTAGAAGTGACTTTTTAACTCTTGCTTTATTTACGGTTCAGGCTTTTGATTTGTTTTCTCTCCTTCAATGCAGAGCTTCCCGGGCCTCCCTCCAATCTGGTTATTTCC[A/T]AGATCAGTTCACGATCTGCTACGCTCAAGTTCCGCGCAGGGGATGATGGGAAGACGGCCATCTCCAAGTGGATCGTTGAGGGGCAGGTGAGTCATGTTGCAGTTCTTCTTCATCCGATCATTATCCGCCTACCATTCACTGGCCTGAAGCTCTACATCTTCACAGTCTTCACCAGTAAATATAAACACTTCTCGTTACAATGAAACGTCTCTGCAGTGCTGAATTATGACTGTGTGTGCATAGGCTTTGTCTACTTATTCTAGATATGTGCATTTCAATTGTTTTGGGCGATTGATAAATCAGGAGAATCCCATGTGGGAAAGTGAAGCAAAAAAATGTGGCACTATCATTTTTATTCATTGGTCAATGTGCACTAAACGCCTTACTGATTTAACCAAGTAGGACATGTTCCTGGATTAACTTCTATGTTGAACTTGCATCAACATTCCAGCCTGTCAATCAGAATTAAGGGATAAGTGTACGTTTTATGTTATTGGTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10734
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111856 | Essential Splice Site | 1022 | 2090 | 22 | 44 |
| ENSDART00000144088 | None | None | 518 | None | 10 |
Genomic Location (Zv9):
Chromosome 3 (position 41072188)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40935548 |
| GRCz11 | 3 | 41077406 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGCTCAGATGCTGGAGGTTCCCAATCTCACCCCCTTCACACACTACAGG[T/G]CAGTCAGACCCCTCCACAGGCATACATTAACTGCTTTTAACGCAGCAATT
Long Flanking Sequence:
CTTGTTGGCGTCAACGCGAACAGGCAAGAGATCCAGACAAACGACAAAACATTTAAATTTCATTTAAATGAATAAATATTTTGATATTATTTAGATTATTTTTAAAAATGCATGTTGTTTGCAAAACAAAATAATAGATTTTATATTATAATTTTACACAATGCATATTATTATTATTATTATTATTATTATTATTATTACAAATGTTGTTTTTAAAGTCATTGCTGTTTAATTAAATTTTATTTAATTGTATTTTATTTAATTTTATTTAGAAATAAAACTTGGCACATTGACTTTCCCCATTTACATGTGTATAAATGAGTCTACATTAGTAAACTAATACAGCTGCTTTCCTATAACCCTTGCTTTGCTTTTCTCTCTTTCTTCAGGTTGGCAGTATCGGTGAAGATGAAGAGTGGAAGGTGTTATATGAAAAAGAGAACGACCCTGAAGCTCAGATGCTGGAGGTTCCCAATCTCACCCCCTTCACACACTACAGG[T/G]CAGTCAGACCCCTCCACAGGCATACATTAACTGCTTTTAACGCAGCAATTGCCATATAAACGGCATTTTCATTTATTTTAAACACGCACATTAAGCGAGCCTAATTAAATAACGGCACGTAGATTACTGCAATTACAGTTGCATTAGCGAAGACACGTTTGCACTTTAATCAGATTATGATTCTGTGCCTGCATAAACAAATCGAACGGTTCACAGTTCAAGTCAGCACTGCGGCAAGGCTTTCTCTTCTGTATTTATGCCTCTGATCTTGTTATTTTCTGCTTCCTTCCCCGAGGACGCCGTTAATTCATTCCTTTCTTCTTTCTTGTTCTGTCTGATCTTGACATCTTTGTGATATTTGTCTTATGCCGGAAAAAGACAATTGAACAGAGATTTGATGCGGAGTTGCTGAGACGCAGTGTGTGTGCATGAAATCTATTTACGCTCAGAAAACACTTCTTTTATGCATGGACTTCAGAATTCACTGCACACTGCAAGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1775
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111856 | Essential Splice Site | 1522 | 2090 | 32 | 44 |
| ENSDART00000144088 | None | None | 518 | None | 10 |
Genomic Location (Zv9):
Chromosome 3 (position 41018098)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40881458 |
| GRCz11 | 3 | 41023316 |
KASP Assay ID:
554-1768.1 (used for ordering genotyping assays)
KASP Sequence:
GACTCAAAGCGGCCCGTCAACAGCTCCCAGCTGCGYACCGAACTGACAGG[T/C]AACTAGCGGGAGGAGGCTCTCCTCTTGAACCAGAAACGTCTGCACGCAGG
Long Flanking Sequence:
ACAGCGATCCTGCAATCTGAAGGGATATTAATTAGTAGCTGAAACCTTTATTCACTGACCTATGAGTCCTGAATCTTCTCACTACTGTCTGTTTTATCAGCAGAGCCGTAGGCCGAGTTGATTACACTCAGCTCCGAGCTTTGTTAATTACCCACTGACTGAACGGCTCAGAAATTAAATCCTCATCTTTTATTTATCTTATCCGTTTGGCGGCAAACGTCGCGCACCGACGCGCGATGGAAGATCAGTCAGCAATGTCTGTCAGTTACAACTGGGACGGCTTTTTTTTTATCAGGCCGTGCTTTAATAAGGACCGTGAGAACAGCCAGCGGAATGTGACCTTTAATTAAATCTGTGCCTCTGCAGACGCCCAAGGAGGAGAGTGTGAATGGGGTTCTGGTGGGCTATCGGCTCTACTACCGCGAGCTGCAGTATGACAGCACTCCGCAGGACTCAAAGCGGCCCGTCAACAGCTCCCAGCTGCGCACCGAACTGACAGG[T/C]AACTAGCGGGAGGAGGCTCTCCTCTTGAACCAGAAACGTCTGCACGCAGGCGTGATTTATAGCTCCAGTGCTTCTTTCAACACTTTAACCCATCCAGTTATTGAAAAAAAACACATTCCTTAACGTTTCTGACGTGTGCCTTTGTGCAAAGATGAATATTGTATTTGCCAGCTTCACTGTGGAAAAGAAAGTGGAGGTATGAAACTGGGACACAATCAGCAGTGGCAAGTAATGAAATCCACATTAATAAGGTGAATATTGTGCATGTTTGAGCGTTATCGAAGCGTCAGGACGCTCGTCCTCCCTGCAGTTAGAGAATAAATTTCCGCTGGATGGCTGAGCGTAGGTGAACTCATTACGCGCTCAGCCTGTGTGAGGTGCGGAATCATGAGTTCGAGCTCAAGTGTTCGCGCCGACGGCCTCTTTTTCCGCAGCCTGGATCCGGCTGCTAAATCTCCTTTGACAAATTGGACTCAGCAGTGTTGACAGCATTTAAATGC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |