ZMP
jag2
Ensembl ID:
ZFIN ID:
Description:
protein jagged-2 isoform 1 [Source:RefSeq peptide;Acc:NP_571937]
Human Orthologue:
JAG2
Human Description:
jagged 2 [Source:HGNC Symbol;Acc:6189]
Mouse Orthologue:
Jag2
Mouse Description:
jagged 2 Gene [Source:MGI Symbol;Acc:MGI:1098270]
Alleles
There are 12 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
hu3425 | Nonsense | Confirmed mutation in F2 line | Not yet available |
sa13408 | Essential Splice Site | Available for shipment | Available now |
sa23675 | Essential Splice Site | Available for shipment | Available now |
sa45693 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa1720 | Essential Splice Site | Available for shipment | Available now |
sa10654 | Nonsense | Available for shipment | Available now |
sa29338 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa10420 | Essential Splice Site | Available for shipment | Available now |
sa6629 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
hu3425
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Nonsense | 30 | 1254 | 2 | 26 |
ENSDART00000049586 | Nonsense | 30 | 1216 | 2 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21464049)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21492216 |
GRCz11 | 20 | 21391889 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTCTTTCTGTTTTTCAATGTATTTTTAGGTGTCCCAGTCCTCTGGCTA[T/A]TTTGAGCTGCAGCTGATTGCTGTAGAAAATGTAAACGGTGAGTTGTGGGA
Long Flanking Sequence:
TGCTGTTAACGATGTGGACGAAGGTGAGAGCTCTGATTGTTATTAGTGTTGCAGATCGATTTAATTGCCGTAGCACTGATCAGGAGGCAAAAGTTGATGGGTGTGGGCAGACGATTTCAACCGTTTCTGCTTAAAGTGATCGATATTTGAATTACGCAGCCACATGTGCGCGTGCATTTGGAAATGTCAGATGTAAGAAATGTTAACTTGAAACACGATTCCTCATTAAAAGCACGGGTGGATCAGTTTTATAGGATATTGTATGAAATAAAGCCGATTTTCTCATCTCATCCGCATAACAGGTTTGCAAAATTGTAGACTGATTCTCTGGAGACTTGAATGCACAAGCGCACGCGACACATTCCCTCAAATTAACATTAGCACAGATTTATCTGCATTTCTGTAATGCACAATCAGCATTATGATTGCTCTGTTTGTTTGTTTATTTATTTGTCTTTCTGTTTTTCAATGTATTTTTAGGTGTCCCAGTCCTCTGGCTA[T/A]TTTGAGCTGCAGCTGATTGCTGTAGAAAATGTAAACGGTGAGTTGTGGGACGGGGAATGTTGCGACAGCACGCGGAACTCTCAAGACCAGCGCTGCGTGCGGGACGAGTGCGATACTTACTTTAAAGTGTGTCTGAAGGAGTACCAGTCTGAAGTCACCACCACTGGACAGTGCACCTTCGGCTCTGGATCTACCGACGTTCTTGGTGGAAATATAATTTCTTTTAAGACCGCAAAAAACAGCCCCAGCAAAACGAGCGACGTGGGAAAGATCATCATCCCTTTTCACTTCGCCTGGCCGGTGAGTCCTCGTCTTCTCCATGGGCTGTAATAAAAAAACGCGCCGCGGTGAGCTGTCACTGCTCGGAAGTTGAGTGCACTATATTGTTAGGGTGATGACAGGGTCTCTATTTTAATCGTGGGGCGTGTAGGCTGCTGTCTTTTAACGATTTTCTGTTATTTCTGTGACTGCTTCATCTGTAGGGCACTCACTTTGCTCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13408
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 130 | 1254 | 2 | 26 |
ENSDART00000049586 | Essential Splice Site | 130 | 1216 | 2 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21464351)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21492518 |
GRCz11 | 20 | 21392191 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACGAGCGACGTGGGAAAGATCATCATCCCKTTTCACTTCGCCTGGCCGG[T/G]GAGTCCTCGTCTTCTCYATGGGCTGTAATNAAAAAACGCGCCGCGGTGAG
Long Flanking Sequence:
GTTTGCAAAATTGTAGACTGATTCTCTGGAGACTTGAATGCACAAGCGCACGCGACACATTCCCTCAAATTAACATTAGCACAGATTTATCTGCATTTCTGTAATGCACAATCAGCATTATGATTGCTCTGTTTGTTTGTTTATTTATTTGTCTTTCTGTTTTTCAATGTATTTTTAGGTGTCCCAGTCCTCTGGCTATTTTGAGCTGCAGCTGATTGCTGTAGAAAATGTAAACGGTGAGTTGTGGGACGGGGAATGTTGCGACAGCACGCGGAACTCTCAAGACCAGCGCTGCGTGCGGGACGAGTGCGATACTTACTTTAAAGTGTGTCTGAAGGAGTACCAGTCTGAAGTCACCACCACTGGACAGTGCACCTTCGGCTCTGGATCTACCGACGTTCTTGGTGGAAATATAATTTCTTTTAAGACCGCAAAAAACAGCCCCAGCAAAACGAGCGACGTGGGAAAGATCATCATCCCTTTTCACTTCGCCTGGCCGG[T/G]GAGTCCTCGTCTTCTCCATGGGCTGTAATAAAAAAACGCGCCGCGGTGAGCTGTCACTGCTCGGAAGTTGAGTGCACTATATTGTTAGGGTGATGACAGGGTCTCTATTTTAATCGTGGGGCGTGTAGGCTGCTGTCTTTTAACGATTTTCTGTTATTTCTGTGACTGCTTCATCTGTAGGGCACTCACTTTGCTCTGCGTGTTTGAAACGGGCTGCTTGAAGGTGCATTTAAGGTGACACGCACCTCTTAAAGAGATAGCTCACTGTTGAATGGAAATTCTGCTACTTGGTCACCTTGTTTCCCACCTGTGTTGGTTATTTATTTTAGAAACACGAAGTAATTAGATAATATTGTTATTTACTCGAAGAAATATTGATTGAAAGTGAATGGTGACTTAAGTCTGTCATCCTGTCAAGCGGAAGCTTTAAAAGATACTTTCTAACAGAATAGTTTGTTTTAATTGGCTGTGTTACAAATCTGCTTAGTTGTACATCTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23675
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 255 | 1254 | 5 | 26 |
ENSDART00000049586 | Essential Splice Site | 255 | 1216 | 5 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21502521)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21530688 |
GRCz11 | 20 | 21430361 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGCTGTAATCTGATTCACGGAGGCTGTGCGGTGCCTGGAGAATGCAAG[T/C]AAGTGTCTGAGCATCATTTCATGGTCGGTTGGCCCGGCTAATCTAGCTCC
Long Flanking Sequence:
GACCTGCTGCTATCAGTGTTTTCACAGCCCTGCGATCTTTGCTTCTCTGCCTGGAGGTGAGATTGTGTTGTAAACGACACCTCTGGAGTCACACTTTCCATTAGCTCAATTAATCTGGGTGATGCTAGGGTTTTTGATTTCTTCAACCCACCACTGCAGGCAACCTAAACACCTTTCTTTTCCAACACTATAAGTCTGTATGTGTGCATATACACCACTAAAGAAAGGCAGTAAATCACCAGACACCATCTTAATGAGGGAGGGTACGAGTAGGTGGGCGTAGCAGGGGTGGACGGGGGCAAGCGCATGTGTGTGTTTGAGCAATAAAGTTGTCTTCTGTCACGGCGAGCATGATGAATTTATCTTGTCGCACTTGTAAGGCAACACAAACAAACAAGACTGACCTCTCCTCCCTCCTCCCCTCTCTTTCTCTCTCAGCGATCTGCAAGCAGGGCTGTAATCTGATTCACGGAGGCTGTGCGGTGCCTGGAGAATGCAAG[T/C]AAGTGTCTGAGCATCATTTCATGGTCGGTTGGCCCGGCTAATCTAGCTCCTTAATTTCAGCAGGGCCATATGTGCTCATGCTGATAAGGTCTTTTCATTTGTTTACCTTGCTATTAATTAATTAGCGCAGTGAGGACATTGTTTGCGCAAGCAGTTTTTGTTTATTGTGCTTTTTAAAAAATCATGCTGTAGCGTTAAAAAGTTATGATTTGATTGTCATTTGATTAGATTAAATACTTGAAGGCGTCACTAGCACTGTTGTTCATGCTCAAAATGGATAGCTAACCAAAAACTAAACAAAAAAAAATATGATAAACACTTTATAGCCTCCATATTGCCTCAAATGCATTTTCAATTATATTTAAAGGGTCACGAAACACCAAAACACATTTTTTTGTCGAGAAACATGTCGAAAAGTCAGCGCGCCCAAATAGACACTCCCACACCATGCCTCTTTTCTTTCTCCGACACTCCCCCCTAAACAAAGCTGGACACGCCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45693
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 453 | 1254 | 10 | 26 |
ENSDART00000049586 | None | None | 1216 | None | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21520067)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21548234 |
GRCz11 | 20 | 21447907 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCACTGTGACTGCTTTCAAGGATGGGCCGGACAGAACTGTGACATCAG[T/G]CAGTATCTCCTCAAGCTCCTCTCCTCTCTTTTCCTCCATCTTTGAGCTCT
Long Flanking Sequence:
TTGTAAAGATTGTTTTTGTGTGTAATCAAATTTATTGAATAACGAAAGATATTATTAATCTATTAAATTGTGTTTTTCCAGTAAAAATAGCTTTGTTTTTACTAGAACACAAACCAGATACACTAGTAAAGTGTTTTATGTGTGTGTGTGCCTGTGTTATGCTCATTGCTCAGGAAGTCAAGCAGCCCTGGCATCGTTGTGACTGTTAGAGTTTCAAGCCAACAAGCTTTTCAATGGGCTTAATGGTGGTGGGGTTACACAACAAGAGCTCCAATTTCGCCTGCTCCTCTCCTGCTACTCTACACTTCCCATCTCCACTTCGGTCTCGCAATCTACCAAATTGTCTACGAAATCTCCCAACTCTTTCTTTCCCTCACTTTCGCAGATGCAAATGAGTGTATGGGGAAGCCTTGCGTAAATGCTCACTCTTGCAAAAACATGATTGGTGGATATCACTGTGACTGCTTTCAAGGATGGGCCGGACAGAACTGTGACATCAG[T/G]CAGTATCTCCTCAAGCTCCTCTCCTCTCTTTTCCTCCATCTTTGAGCTCTATAATGGCAGCCAGGCTTTCCTCTTCAGACACTTGATGGCTTTTGGGATTCTTCACGCTGTATATTTGGTCTTAGGCTTCACCTACTGTTGCATGCTGGGCTTTTTTTGTGTGCGTATGTTGATTTAAACTAACATTTCCATCTTCACAGCACTCACCAAAGCTCATCTGATTTGAGTTAATTGCACATCTTCAACTGCTCTCCTTTATTTCCTCCACTTAGCCATTGATTAATTTGCTTTGCTCATTGACTGCAGATCTCAATGGCTGCCATGGACAGTGCCAGAATGGAGCTACTTGCAAGGTATGTAGACTTTTAAGGTGCTGTATTGTCGCTTCAGCTAATTGTGCTGTTGGTGAAGGGTGGATTTATTTGTGTCTGTGCAGGAGCTGGTTCATGGAGGTTACCACTGTCAGTGTCCTGCGGGGTTTGTGGGCTTACACTGTGAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1720
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 468 | 1254 | 11 | 26 |
ENSDART00000049586 | Essential Splice Site | 430 | 1216 | 10 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21520422)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21548589 |
GRCz11 | 20 | 21448262 |
KASP Assay ID:
554-1666.1 (used for ordering genotyping assays)
KASP Sequence:
AGATCTCAATGGCTGCCATGGACAGTGCCAGAATGGAGCTACTTGCAAGG[T/A]ATGTAGACTTTTAAGGTGCTGTATTGTCGCTTCAGCTAATTGTGCTGTTG
Long Flanking Sequence:
CCCAACTCTTTCTTTCCCTCACTTTCGCAGATGCAAATGAGTGTATGGGGAAGCCTTGCGTAAATGCTCACTCTTGCAAAAACATGATTGGTGGATATCACTGTGACTGCTTTCAAGGATGGGCCGGACAGAACTGTGACATCAGTCAGTATCTCCTCAAGCTCCTCTCCTCTCTTTTCCTCCATCTTTGAGCTCTATAATGGCAGCCAGGCTTTCCTCTTCAGACACTTGATGGCTTTTGGGATTCTTCACGCTGTATATTTGGTCTTAGGCTTCACCTACTGTTGCATGCTGGGCTTTTTTTGTGTGCGTATGTTGATTTAAACTAACATTTCCATCTTCACAGCACTCACCAAAGCTCATCTGATTTGAGTTAATTGCACATCTTCAACTGCTCTCCTTTATTTCCTCCACTTAGCCATTGATTAATTTGCTTTGCTCATTGACTGCAGATCTCAATGGCTGCCATGGACAGTGCCAGAATGGAGCTACTTGCAAGG[T/A]ATGTAGACTTTTAAGGTGCTGTATTGTCGCTTCAGCTAATTGTGCTGTTGGTGAAGGGTGGATTTATTTGTGTCTGTGCAGGAGCTGGTTCATGGAGGTTACCACTGTCAGTGTCCTGCGGGGTTTGTGGGCTTACACTGTGAAGTCTCAAGGAATAAATGTGCCAGCGGTCCATGTCAGAATGGTGGCCGCTGCCATGTCATTCTGGACAGCTTCGTTTGTGAGTGTCCGTCAAACTACGCAGGGATGCTCTGTGAGGTGAGAAGCATTAGTGATTATGGTATTATTATTATTTTAGTTTGGTTTGTATTTTTGGTTGGGTTTAATTAATTAATTAATTTATTTATTTACTTATTTATTTATTTATCTATGTATGTATTTTTGTATATCTATTTATCTTTATTTGTCTATTTATTTATTCATTTATCTATTAATTAATTAATTAATTAATTAATTAATATTTTATGTATTTATTTATTTATGTTTATTTGTCCATTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10654
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Nonsense | 479 | 1254 | 12 | 26 |
ENSDART00000049586 | Nonsense | 441 | 1216 | 11 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21520536)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21548703 |
GRCz11 | 20 | 21448376 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTATTTGTGTCWGTGCAGGAGCTGGKTCATGGAGGTTACCACTGTCAGTG[T/A]CCTGCGGGGTTTGTGGGCTTACACTGTGAAGTCTCAAGGAATAAATGTGC
Long Flanking Sequence:
AAGGATGGGCCGGACAGAACTGTGACATCAGTCAGTATCTCCTCAAGCTCCTCTCCTCTCTTTTCCTCCATCTTTGAGCTCTATAATGGCAGCCAGGCTTTCCTCTTCAGACACTTGATGGCTTTTGGGATTCTTCACGCTGTATATTTGGTCTTAGGCTTCACCTACTGTTGCATGCTGGGCTTTTTTTGTGTGCGTATGTTGATTTAAACTAACATTTCCATCTTCACAGCACTCACCAAAGCTCATCTGATTTGAGTTAATTGCACATCTTCAACTGCTCTCCTTTATTTCCTCCACTTAGCCATTGATTAATTTGCTTTGCTCATTGACTGCAGATCTCAATGGCTGCCATGGACAGTGCCAGAATGGAGCTACTTGCAAGGTATGTAGACTTTTAAGGTGCTGTATTGTCGCTTCAGCTAATTGTGCTGTTGGTGAAGGGTGGATTTATTTGTGTCTGTGCAGGAGCTGGTTCATGGAGGTTACCACTGTCAGTG[T/A]CCTGCGGGGTTTGTGGGCTTACACTGTGAAGTCTCAAGGAATAAATGTGCCAGCGGTCCATGTCAGAATGGTGGCCGCTGCCATGTCATTCTGGACAGCTTCGTTTGTGAGTGTCCGTCAAACTACGCAGGGATGCTCTGTGAGGTGAGAAGCATTAGTGATTATGGTATTATTATTATTTTAGTTTGGTTTGTATTTTTGGTTGGGTTTAATTAATTAATTAATTTATTTATTTACTTATTTATTTATTTATCTATGTATGTATTTTTGTATATCTATTTATCTTTATTTGTCTATTTATTTATTCATTTATCTATTAATTAATTAATTAATTAATTAATTAATATTTTATGTATTTATTTATTTATGTTTATTTGTCCATTTATTTATTTATTTATTTATTTTATTTTTCTGTTAATTAATTAATTAAATTATGTTTTTATATATTTATATTTTTATTTATTTATATATTTATTTACTTTTATTTAATTATTTATTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29338
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 713 | 1254 | 16 | 26 |
ENSDART00000049586 | Essential Splice Site | 675 | 1216 | 15 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21527589)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21555756 |
GRCz11 | 20 | 21455429 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTACTGTGAATGTGCCAATGGCTGGAAGGGAAAGACCTGCCATTCACG[T/A]CAGTCTTCGTTTTAAATTTTATTTTTATTTTTTTTCCTGTCTTCTTCCTA
Long Flanking Sequence:
TTAAGTCAGCAAGAACCAAATAATGTAAAAACAATGTACATTTCAAAAATGTAAATCTAATCTAAAAAAAAAACACAAAACTTAACTCTAATTTTGGCTATCAAATGTGTTGTTTCAAATGTGAACTTGTTGTCTTTATTTTAAAATCTTAATGTTTGTGTAAATTTTACTTGTCGTCTACCAGATGTAAATGACTGTGTGAGCAATCCGTGTCGAAATGGAGGCACCTGTATTGACGGGATCAGCTCTTTCCAGTGCTTCTGTCCAGATGGCTGGGAAGGAGACCTTTGCAGCATCAGTGAGTGTCCCTCATCATCATCATCAACTTTATCATCTTAACCTTTTTTTACGCTCACTTCCTTACCCTTCCTACTTGTGCTTTTAGATGTGAACGAGTGCAGTCGGAGCCCCTGCAAAAATGGCGGGCACTGTGTGGATCTGGTCAATGACTTTTACTGTGAATGTGCCAATGGCTGGAAGGGAAAGACCTGCCATTCACG[T/A]CAGTCTTCGTTTTAAATTTTATTTTTATTTTTTTTCCTGTCTTCTTCCTATTGTACTGAATATGTGAGCTGACTGATGATATTTTTTGTGTGTTTTAGGTGAAAGTCAGTGTGACTCCTCCACATGCAGTAATGGAGGAACCTGCTATGATCACGGAGATGCTTTCCGCTGTGCTTGTCCTCCAGGATGGGAAGGAAGTACATGCAATACAGGTAAGAAGAGCTCTAGATACCTGGGTCTATTATATATTACAATATTTTTGGGTATTTATTGCAAAAACAATACTATTGAAAATACAATGCATAAGTATCTAGACGCGTAATATATATAAAAATACAAACAAATAAATAACAGTTGATTTAAATTATTATTATATGTCTTTTTTTCTTAATTTTGAACGTATTTTTAAAGAATAGTGGGACAGTCTATCCAACGTGCTCAACCATAATTAAACACACTGAAGCAGCGAATCAAGCTTTTTAGGATTATATAAAATACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10420
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 828 | 1254 | 20 | 26 |
ENSDART00000049586 | Essential Splice Site | 790 | 1216 | 19 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21534728)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21562895 |
GRCz11 | 20 | 21462568 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCCGCTGTGAATGTGCTCCTGGATTTGCAGGACCCGACTGCCGTAWCAG[T/C]GAGTATCTCAAAGAGGAAAGAATGGSGACATATAGAAAGAGGGGTGTTGG
Long Flanking Sequence:
AAGCCTTTTGCTGACAGCGATGAATGTTTGTGCCTGACAACAGGTTTTAATTTTTGGTTTCATTCTATAACACTGGAATTATTTTTCCAGGATAGTTTGAACTTTGAGTGTTAAAACGGGAGAAAAGTGTGAATATGTTTATCCCTGTCTGAGAAAAGTGAGAAAAGTGTAGTGGCGGTTTAACAGCCTTAAAACATCTATAATAATTGTAAAAAATAAAGCTAATTATTTCGCCTGTTGCATGTTTTTTTATAATGTAACTCCTGCGATTAATGAGGGACCCCTGTATTATAGTAGATAATAGTGAACATATTATGATAAAACCTTCACATCTATCATTTAGAAATCAAAATATGTCAATCAGTAGGGGAAAGTTGTCTCTTTCGACTAGTGAACTCATTGTCTTCTTGCAGTTACAATGGAGGAATCTGTGTGGATGGGGTGAACTGGTTCCGCTGTGAATGTGCTCCTGGATTTGCAGGACCCGACTGCCGTATCAG[T/C]GAGTATCTCAAAGAGGAAAGAATGGCGACATATAGAAAGAGGGGTGTTGGTGGATTACCGAGCATCCCGTGCCCTTTGACCTCCTCGGGGGTCAAAGGTTGGCCCTTGCTCACAAACAGACAGAGGGGATAAATTATTCAACCAGTGGAAAAATTCCTCTTCTTATGTCTCTTGTGTCCATTGATGCACATAGAAAACACTCCTTAAAGATTCCATGCATTTCCCCAGCCTCATTTTCTGAGGGCTGGTCATGGGAACGCCATCAATCCTGGCGTTTACAAATGCGTATTGATTTGAGATGACAGTTTTAACTTTCTCTGAATATGACATTTCTGCCTGGGCTGTAGCTGTATTGATGAATGTGTGTTCTCTTTGGTTTACCAGACATCGATGAGTGCCAGTCATCCCCCTGCGCCTATGGTGCCACCTGTGTGGATGAGATCAATGGTTTCCGGTGTGTTTGCCCACTCGGTCGCACTGGACCTCAATGCCAAGAGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6629
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024922 | Essential Splice Site | 1083 | 1254 | 25 | 26 |
ENSDART00000049586 | Essential Splice Site | 1045 | 1216 | 24 | 25 |
Genomic Location (Zv9):
Chromosome 20 (position 21542060)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21570227 |
GRCz11 | 20 | 21469900 |
KASP Assay ID:
554-5389.1 (used for ordering genotyping assays)
KASP Sequence:
GCCGTCATCGAGGTCAAAGTGGAGATGCCGGTCACGTCTCAGCCAGTGGG[T/C]GAGTAGAGCCAACTGGCCTCAAGGCTAAACCAGCMCTCATCCCCCGACCC
Long Flanking Sequence:
GTTTCCTCCGTTCAGTGAAACATTCTGCCTCACGGAAGTTACTTACAAATAGCGGTTATCTCCAAATGCATGCTTTATACTCGGTCAGATTACACTAAATCCCTGCGGTGTTATAACAAGTCACTGAGCGAAGGCCCGTGTTTAACTGGCCTGACTCATTAAAATGGAACCTGTAGGCAGGAACTTTGAACACTGCAGGTTTTTGCATGTTGAAATAATTGAGTCAACCGACTTTTTGATTTGAGTCAACCGCTTTAGTTAAAAGGTTTTTCAACATTTATCTACATGTTTTTGCAGTGCAGTCTGATGTTTATAAACCCTCCATATTATTTTTTTGTTCTCCTGTAGTCGTTCCAGCAGGATGAGCAGCCCAGTCACAGTCAAATCCAGGAGGCTGCGAGTACCATCGTCAGCACACTGTCCAAGCGGCACAACAGCACCGTCATGCTTGCCGTCATCGAGGTCAAAGTGGAGATGCCGGTCACGTCTCAGCCAGTGGG[T/C]GAGTAGAGCCAACTGGCCTCAAGGCTAAACCAGCCCTCATCCCCCGACCCAGTGTCAATTCCCTGTTTCCAGCAATTAGTGCAGCTTAATTGTCTTTGTGAGTCACAGAAGGAAGGGACTGAGTGGCTCAGAGGATGCAGCAGTTGTGGGCAGGAGGCCATAAACCTGTGTGACAGTCATTCAGCTCCTCCACAGTCCTCTGCCACAGCACAGCAATGCATTTAAGATGGCTCACACTTTATTTTTTTTGGATTAAGGGAATTCTAAATAGGTTTTAAAGTATTTGTAACTGAGCACCGACTACATTGGATATAACTGTTGTCCTCAAGTTATTCACAAAGGTTACTGTTAACTTTCATATGTAAAATCAATGGAATCTGACAAGTGTCTCACAAATGTTGTTGTTCAAGGCTTGTGCACACCGGGTGTCGCTTTTTTTCAATGTTTGTTGGTTGTCAGCATTTTACGAGATGTTGTTCTACATTCAAACCCAGGCAATT
Associated Phenotype:
Not determined