ZMP
si:dkey-283b15.2
Ensembl ID:
ZFIN ID:
Human Orthologue:
NPTX1
Human Description:
neuronal pentraxin I [Source:HGNC Symbol;Acc:7952]
Mouse Orthologue:
Nptx1
Mouse Description:
neuronal pentraxin 1 Gene [Source:MGI Symbol;Acc:MGI:107811]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1033 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa1033
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000060666 | Nonsense | 493 | 602 | 4 | 5 |
| ENSDART00000132919 | Nonsense | 488 | 595 | 6 | 7 |
Genomic Location (Zv9):
Chromosome 16 (position 6908482)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 5753013 |
| GRCz11 | 16 | 5652639 |
KASP Assay ID:
554-0937.1 (used for ordering genotyping assays)
KASP Sequence:
TTACCSCTGTCGTTGAGTGATGGTAAATGGCACCATGTGTGTGTGACGTG[G/A]TCRACGCGGGACGGTCTGTGGGAAGCCTATCAGGATGGGGTGAAGAGAGG
Long Flanking Sequence:
CCACAGCGGAATGAACCGCAGCGGATGCCCTTCCAGCCGCAACCCATCTCTAGGAAACATTCACACACACATTCACACACACACTCATACACTACGGGCAATTTAGCCAGCCCAATTCACCTGTACCGCATGTCTTTGGACTGTGAGGGAAACCGGAGCACCCGGAGGAAACCCACACGAAGGCTCCACACAGAAATGCCAACTGAGCCGAGGTTCGACCCAGCAACCTTCTCTCTGTGAGGCGACAGCACTACCTTCTGCGCCACTGCTTCGCCCAATTTGGGAAATATTTTAAAAAGAAAAAAAAATCAAAGGGGGCTAATAACTCTGACTTCAACTGTAAATATATTTACTTTATGACAACAGAAAAATGTGTCAAGAAATGAGTGTTTAATTGAGATTTGTTTTAATCTTTTTCTCTGTGTGTGTGTGTGTTGTCAGGCGGTCACTTTACCGCTGTCGTTGAGTGATGGTAAATGGCACCATGTGTGTGTGACGTG[G/A]TCAACGCGGGACGGTCTGTGGGAAGCCTATCAGGATGGGGTGAAGAGAGGATCTGGAGAAAACCTCTCGCCGTGGCATCCCATCAAACCCGGAGGAGTCTTCATACTGGGACAAGAGCAGGTAGACACACAGAACACCAAACACACCTTTGACTTGCATTGTGGCAATATGTCATACTATTAATTTAATTGAAACCTTTGCTAAAAAATATGTATAAACATAACATTTTAGTGTACTTTAAGAGTTCAGAGTAAAACCATTTTAAAATATATATTTTATTCTGTCAAGTACTGATGACATTTCATCTAAAATATTTAAAATTTATCATGTTTTTGCACAAAATACCAAAGTGGCACATTTGTAGACATGTTTATTTTAAGTTCAACAAAATTCCAATCCTTTAAGAAATAAACTTTTGGTTAAATAATTTTATTCTTAATTTTTATAATCATTTATTTATTAATTTTTAATCACAACTAATGGAAACAATTGCTATTGTG
Associated Phenotype:
Not determined