ZMP
zgc:158403
Ensembl ID:
ZFIN ID:
Description:
Tetratricopeptide repeat protein 39A [Source:UniProtKB/Swiss-Prot;Acc:A1A5Y5]
Human Orthologue:
TTC39A
Human Description:
tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:18657]
Mouse Orthologue:
Ttc39a
Mouse Description:
tetratricopeptide repeat domain 39A Gene [Source:MGI Symbol;Acc:MGI:2444350]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16320 | Nonsense | Available for shipment | Available now |
| sa40015 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa10329 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16320
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091070 | Nonsense | 151 | 565 | 6 | 18 |
The following transcripts of ENSDARG00000062757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 3 (position 14270870)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14516377 |
| GRCz11 | 3 | 14666177 |
KASP Assay ID:
2259-3154.1 (used for ordering genotyping assays)
KASP Sequence:
GAGAATATGGTGAGTTTTATTAAAGGAGGAATCAAAGTACGGAACAGTTA[C/A]CTCATATAYAAGTAAGTGAGTGACRGAAATCTGTRYYATCAAAACACCTG
Long Flanking Sequence:
TTTGATATTTTTCAATCTAATCTCTAACATTTTGAGAGGTCTGATTTAGCTAAACCAACATATTTTTAAAGCTCATCTAAAACTTGACATGAAACAAGTTGCATTAGTGTTTTCTTCACTGTTGTGGAAATGACTTATCAAGCAAGACCAAATGTTAAACTTAATTGTGTCTATTATGAATTGATTGTATGGGGTATAGTTTGCTATCGGTGGATCTCACGACAGGTTTAATCCACCTTTGAGCCAATGAGCATGTCATCAGATAAAAGTAGATTCGTCTGAGATTTATAATTAAACATTACAAGGGACAGATTATTTAAAAAAAAGCTAATTAAATCCTTTGTAATTACAGCAATTGAATTGGCTATTTTAATTTCATAGGAACTTAATTTTGACTTATTCAGTGACTTTGAGCTTTGCATTTAATGTTTGTTTGTTTAATGACAGGATGAGAATATGGTGAGTTTTATTAAAGGAGGAATCAAAGTACGGAACAGTTA[C/A]CTCATATACAAGTAAGTGAGTGACGGAAATCTGTGCCATCAAAACACCTGCTTGTTTTCACCCAATATAAAAAACAACAAATCTTTGTCCCTGTTTAAGTTGCATTTTTGTCAGTTCGTTTACAAATGGCCAATGCTTAATATAGGCAACACGGAGAGTAGCAGTGCTGGAAACCCTAGACAGTTCTTGAATATTAATCGAGTGTTTTCAAGTAGGGCTGCACGATATTGGAAAAATCTGACATTGCAATATTTTGTTTTGCTGTGATATATTTAGATGATTTAGATAGCTTTATTTGAAAAGATGTCTTTAATTTAGATTATTAAAATATAATCAATTACAAGCATATATACAAATGACAGAGCGAAAATATAAGTGAAATAAATAGTGCTTTATGGTTTTCTGGGGGGTCTAACATTTGAAAAATATAATATAACACATGAAAAATAGAAATTGAGCAATCAAATGCAAAATAACATGGTTATCGTTGTATAGTAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40015
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091070 | Essential Splice Site | 188 | 565 | 7 | 18 |
The following transcripts of ENSDARG00000062757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 3 (position 14272472)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14517979 |
| GRCz11 | 3 | 14667779 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAGCACTTAGAGGGCGGAGTCTCGTTTGGCATCGGCGCTTTTAATTTGG[T/C]ATGTTCATCTGGAATGCTGCATCTGTTTTTATTCGCATAAATGTTTTTCT
Long Flanking Sequence:
GGAAAGAAAACAGAGAATACATCTAATTCAAAACATGAAGTACAATACAGCAAAGTGCTTCAAAAGTACTTAAATATGGATTATATATATAATACTTTGGACAAGGTGTAATAACCCTGAGGCAAAAATGGGCTCTTGCCCATATTCAGCCACTTATAGAGTTAATTAAAAACATATTTGATCAAGTTTCTATCGTTGTGCAATCGCTTGTGTGGTTAAGCGATGCTGACTGAACACATCATAGTTAAGGTACATGGTGTGAGAACACACAATAAAACATTCATAATTGCAATCAGAGTCAGAGCCTTTAATTCCCACTTGTGTGCCAAGATAAAGCCCTTGAATTAAACTGTTTCTGCAAATGTGAATGCTGTGAATGAAGTCATGGTTCTTCTGCAGGGAGCTGCACGCCTTCATCCAATCAGACGCCACTTTCAAAGGACCAAACCACAAGCACTTAGAGGGCGGAGTCTCGTTTGGCATCGGCGCTTTTAATTTGG[T/C]ATGTTCATCTGGAATGCTGCATCTGTTTTTATTCGCATAAATGTTTTTCTGCTAATAGCTATATATTTTTATACAAAGTTGCTAATTTATATTATGTGAAGAATGTAAATATTGCATAAAAATTTTGCAATAAAACATGGTTTCAATCCAGTGTGTTCTGAGGAATTAAAGCCATAGCTTTCTCGAGAAAACAGTGCAGTATATGAATAAAAACGATTGTTTCTGCAAGAGCTGAGAAACCACTTTAGCATTTTTTTTCTTTGAGAGTGAATAATAATGATGTAGCAATAAAGCCTGAACCAATTTGCTGATTCAAATTTAGTTGAGTTGCCAAAAAAATTGCTATACACTTGAAGAAGTTTATTTACATGAATGGATCTCTAAGGCTGCATTTACACGGCACTGTTCAAGTGACTCAATTCCCATTATTTATTTATTTTTTTCTCCCATGTGGCACAGATCGGATATGGCCCATGTATGTGTAGGCACGAAAAAATCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10329
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091070 | Nonsense | 474 | 565 | 16 | 18 |
The following transcripts of ENSDARG00000062757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 3 (position 14289044)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14534551 |
| GRCz11 | 3 | 14684351 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGACGACACRTGTTTAATCCAGCTTCTGAAAGGCCTGTGTCTGAAGAAC[C/T]AAGGCCAGATGCAGGCGGCAGAGGACTGTTTCAACCAGGTTTACATCAGG
Long Flanking Sequence:
GCTTAATCTCCTTCAATTATCATTCACTTAAATGGGGATGTCTGTATATTTCCTATCTATTAACCTTTTTCTTCAATCCTTCCTAAAAATACTTGTTTTCATTCTCAACCTAAATGTAATGGTCTGTTTTTTCATTACATGAACTTCCTCAATTATCTGAAATCACTGCTTACATTTCAACATTGAGTCTTTAAGCCAGTTTCTTGTTATAGTCTTTTTGCATGCCACAAGAAGATTTTTACACAAATAATAGTCACCTCTGGGGACAATCTCCTTGATATCTCCCATAAACAGAAATAATGCAATAATGCTGTATCCAAACACCTCAGAAATAAGTCTAATTTTTATATCTATTAAATCTAGGTTTGCATTTGTCAGTGTATATCACGTTGGTTTATATTTTAAATTGATCTATTTATTCTGCTTTGTGTTTAGATAACGAGTACACGGTTGACGACACGTGTTTAATCCAGCTTCTGAAAGGCCTGTGTCTGAAGAAC[C/T]AAGGCCAGATGCAGGCGGCAGAGGACTGTTTCAACCAGGTTTACATCAGGTTAGTGCTTCTCTCTTTTGGAAATGCTTCTTCTTCCCCAAGACTGTGTCTGAGATGTCCTTTGTGTGTTTAACAGTGAAAAGAAGCTGAAGTTTGATCACTACCTTGTTCCAAATGCTCTGCTGGAGATGAGTCTACTGTTTATAGACACGGGGAGGAAAGAGCAAGCCATCAAACTACTACAGAAAGCAAAGTAAGTTCAATCTAGAACACACAGATGAGGGGAAGATACACTTTTACTGGTTTAGTGTCACTTATTTATTTGTCTAAAGTGACTCAATGATGCTTTCCAGTCTTTAACACTGCAAAAAGGCATGCACTTAGATTTCTTGACTTGTTTCTTGTCCAAATATCAAAAAAATCTTAAATCAAGAAGCATTTTCTAGAAAAGAAAAACATATTGTCTTGTTTTAAGAAATAATAAATCAAATTAAGTAAGGTTTTCCTTAAA
Associated Phenotype:
Not determined