Busch Lab

ZMP

zgc:158403

Ensembl ID:
ENSDARG00000062757
ZFIN ID:
ZDB-GENE-061215-116
Description:
Tetratricopeptide repeat protein 39A [Source:UniProtKB/Swiss-Prot;Acc:A1A5Y5]
Human Orthologue:
TTC39A
Human Description:
tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:18657]
Mouse Orthologue:
Ttc39a
Mouse Description:
tetratricopeptide repeat domain 39A Gene [Source:MGI Symbol;Acc:MGI:2444350]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa16320 Nonsense Available for shipment Available now
sa10329 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16320
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091070 Nonsense 151 565 6 18

The following transcripts of ENSDARG00000062757 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 14270870)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 14516377
GRCz11 3 14666177
KASP Assay ID:
2259-3154.1 (used for ordering genotyping assays)
KASP Sequence:
GAGAATATGGTGAGTTTTATTAAAGGAGGAATCAAAGTACGGAACAGTTA[C/A]CTCATATAYAAGTAAGTGAGTGACRGAAATCTGTRYYATCAAAACACCTG
Long Flanking Sequence:
TTTGATATTTTTCAATCTAATCTCTAACATTTTGAGAGGTCTGATTTAGCTAAACCAACATATTTTTAAAGCTCATCTAAAACTTGACATGAAACAAGTTGCATTAGTGTTTTCTTCACTGTTGTGGAAATGACTTATCAAGCAAGACCAAATGTTAAACTTAATTGTGTCTATTATGAATTGATTGTATGGGGTATAGTTTGCTATCGGTGGATCTCACGACAGGTTTAATCCACCTTTGAGCCAATGAGCATGTCATCAGATAAAAGTAGATTCGTCTGAGATTTATAATTAAACATTACAAGGGACAGATTATTTAAAAAAAAGCTAATTAAATCCTTTGTAATTACAGCAATTGAATTGGCTATTTTAATTTCATAGGAACTTAATTTTGACTTATTCAGTGACTTTGAGCTTTGCATTTAATGTTTGTTTGTTTAATGACAGGATGAGAATATGGTGAGTTTTATTAAAGGAGGAATCAAAGTACGGAACAGTTA[C/A]CTCATATACAAGTAAGTGAGTGACGGAAATCTGTGCCATCAAAACACCTGCTTGTTTTCACCCAATATAAAAAACAACAAATCTTTGTCCCTGTTTAAGTTGCATTTTTGTCAGTTCGTTTACAAATGGCCAATGCTTAATATAGGCAACACGGAGAGTAGCAGTGCTGGAAACCCTAGACAGTTCTTGAATATTAATCGAGTGTTTTCAAGTAGGGCTGCACGATATTGGAAAAATCTGACATTGCAATATTTTGTTTTGCTGTGATATATTTAGATGATTTAGATAGCTTTATTTGAAAAGATGTCTTTAATTTAGATTATTAAAATATAATCAATTACAAGCATATATACAAATGACAGAGCGAAAATATAAGTGAAATAAATAGTGCTTTATGGTTTTCTGGGGGGTCTAACATTTGAAAAATATAATATAACACATGAAAAATAGAAATTGAGCAATCAAATGCAAAATAACATGGTTATCGTTGTATAGTAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10329
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091070 Nonsense 474 565 16 18

The following transcripts of ENSDARG00000062757 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 14289044)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 14534551
GRCz11 3 14684351
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGACGACACRTGTTTAATCCAGCTTCTGAAAGGCCTGTGTCTGAAGAAC[C/T]AAGGCCAGATGCAGGCGGCAGAGGACTGTTTCAACCAGGTTTACATCAGG
Long Flanking Sequence:
GCTTAATCTCCTTCAATTATCATTCACTTAAATGGGGATGTCTGTATATTTCCTATCTATTAACCTTTTTCTTCAATCCTTCCTAAAAATACTTGTTTTCATTCTCAACCTAAATGTAATGGTCTGTTTTTTCATTACATGAACTTCCTCAATTATCTGAAATCACTGCTTACATTTCAACATTGAGTCTTTAAGCCAGTTTCTTGTTATAGTCTTTTTGCATGCCACAAGAAGATTTTTACACAAATAATAGTCACCTCTGGGGACAATCTCCTTGATATCTCCCATAAACAGAAATAATGCAATAATGCTGTATCCAAACACCTCAGAAATAAGTCTAATTTTTATATCTATTAAATCTAGGTTTGCATTTGTCAGTGTATATCACGTTGGTTTATATTTTAAATTGATCTATTTATTCTGCTTTGTGTTTAGATAACGAGTACACGGTTGACGACACGTGTTTAATCCAGCTTCTGAAAGGCCTGTGTCTGAAGAAC[C/T]AAGGCCAGATGCAGGCGGCAGAGGACTGTTTCAACCAGGTTTACATCAGGTTAGTGCTTCTCTCTTTTGGAAATGCTTCTTCTTCCCCAAGACTGTGTCTGAGATGTCCTTTGTGTGTTTAACAGTGAAAAGAAGCTGAAGTTTGATCACTACCTTGTTCCAAATGCTCTGCTGGAGATGAGTCTACTGTTTATAGACACGGGGAGGAAAGAGCAAGCCATCAAACTACTACAGAAAGCAAAGTAAGTTCAATCTAGAACACACAGATGAGGGGAAGATACACTTTTACTGGTTTAGTGTCACTTATTTATTTGTCTAAAGTGACTCAATGATGCTTTCCAGTCTTTAACACTGCAAAAAGGCATGCACTTAGATTTCTTGACTTGTTTCTTGTCCAAATATCAAAAAAATCTTAAATCAAGAAGCATTTTCTAGAAAAGAAAAACATATTGTCTTGTTTTAAGAAATAATAAATCAAATTAAGTAAGGTTTTCCTTAAA
Associated Phenotype:
Not determined