Busch Lab

ZMP

tlr9

Ensembl ID:
ENSDARG00000044490
ZFIN ID:
ZDB-GENE-040219-10
Description:
toll-like receptor 9 [Source:RefSeq peptide;Acc:NP_001124066]
Human Orthologues:
RP11-330H6.5, TLR9
Human Descriptions:
TLR9 [Source:UniProtKB/TrEMBL;Acc:C3W5P5]
toll-like receptor 9 [Source:HGNC Symbol;Acc:15633]
Mouse Orthologue:
Tlr9
Mouse Description:
toll-like receptor 9 Gene [Source:MGI Symbol;Acc:MGI:1932389]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa34528 Nonsense Mutation detected in F1 DNA Not yet available
sa1171 Nonsense Confirmed mutation in F2 line Not yet available
sa10328 Nonsense Available for shipment Available now
sa12600 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa34528
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124218 Nonsense 554 1069 2 2
Genomic Location (Zv9):
Chromosome 8 (position 55865486)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53902216
GRCz11 8 53731936
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCCACCAATTCTCACATCTGAGCAAACTATCTTACCTTAATATGGCGTA[C/A]AACCGTATTGACCTGTATTCCGACAAGGCCTTTCAGGAGGTCAGTGGCAC
Long Flanking Sequence:
CGCAGCATTGCACCTTTGGTCAAACTTCCAAGACTTGAGGTCTTAGATTTACGCATGAACTTCATCTGCGACATTAGCATTGACGGTCTTAGCCAGCTGAGGACATTAAGAAGAGTAGATCTTTCCCAGAACATGCTCGCCTTTAGTTCGTGCTTTTCAACATGCACTACTGAAGCAGAACACCAAATCCCTGACAGACATGGCAATGAACAGTTCAACCTCCAAATGCAAGAACTCCCCATTCTGAATGCAGAAACACAAGGCTCAAATCCAGACTACTGTTCGTTTTATTTCTCCATGTGGCATTTCAAAAGACAAATCTGCTCTAAAAGCTTATATTTTGACCTGTCTCAGAACAACATCCCATGGCTGAACGCAAGCACTTTTAGAGGCATGGACAGAGTGGCATGCGTAGATCTGTCCTACAACTACATCAGTCAAACTTTAAACGGCCACCAATTCTCACATCTGAGCAAACTATCTTACCTTAATATGGCGTA[C/A]AACCGTATTGACCTGTATTCCGACAAGGCCTTTCAGGAGGTCAGTGGCACCCTAAAGGCTCTTGACCTCAGCAATAACGAGTTCCACTTTATAATGAAGGGAATGGGGCATCAGTTCACGTTCCTCACGCACATGTCGTCTCTTATAATACTAAGTCTAGCAAACAATCACATCGGTCTCCGGATCTCAAACATCCTCACCAGCGCTTCTCTGAAGTATCTCATTTTCTCTGGGAATCGTTTGGACATATTGTGGGACTCTTGGCGTAATCAATACATAAACCTCTTTCAGGGACTCACCAACCTTACGCACTTGGACATCTCTGAAAATCAGCTCAAATCTCTCTCCCCAGAGGTAATCGTGAACTTGCCTTTGAGTCTCCAAGTTCTCCGAGTCGACTTCAACATGTTGACGTATTTCCCGTGGGCAAACATCTCAGTTCTCCAGCAACTCTGCTACCTCAATCTGAGTTCAAACATGCTTTCGTACTTGCCCAATAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1171
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124218 Nonsense 642 1069 2 2
Genomic Location (Zv9):
Chromosome 8 (position 55865749)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53901953
GRCz11 8 53731673
KASP Assay ID:
554-1081.1 (used for ordering genotyping assays)
KASP Sequence:
GAAGTATCTCATTTTCTCTGGGAATCGTTTGGACATATTGTGGGACTCTT[G/A]GCGTAATCAATACATAAACCTCTTTCAGGGACTCACCAACCTTACGCACT
Long Flanking Sequence:
CTCAAATCCAGACTACTGTTCGTTTTATTTCTCCATGTGGCATTTCAAAAGACAAATCTGCTCTAAAAGCTTATATTTTGACCTGTCTCAGAACAACATCCCATGGCTGAACGCAAGCACTTTTAGAGGCATGGACAGAGTGGCATGCGTAGATCTGTCCTACAACTACATCAGTCAAACTTTAAACGGCCACCAATTCTCACATCTGAGCAAACTATCTTACCTTAATATGGCGTACAACCGTATTGACCTGTATTCCGACAAGGCCTTTCAGGAGGTCAGTGGCACCCTAAAGGCTCTTGACCTCAGCAATAACGAGTTCCACTTTATAATGAAGGGAATGGGGCATCAGTTCACGTTCCTCACGCACATGTCGTCTCTTATAATACTAAGTCTAGCAAACAATCACATCGGTCTCCGGATCTCAAACATCCTCACCAGCGCTTCTCTGAAGTATCTCATTTTCTCTGGGAATCGTTTGGACATATTGTGGGACTCTT[G/A]GCGTAATCAATACATAAACCTCTTTCAGGGACTCACCAACCTTACGCACTTGGACATCTCTGAAAATCAGCTCAAATCTCTCTCCCCAGAGGTAATCGTGAACTTGCCTTTGAGTCTCCAAGTTCTCCGAGTCGACTTCAACATGTTGACGTATTTCCCGTGGGCAAACATCTCAGTTCTCCAGCAACTCTGCTACCTCAATCTGAGTTCAAACATGCTTTCGTACTTGCCCAATATTAACTTTGAGCTCCGTCTCACAGGACTGGATTTAAGTCACAACCGACTGGTTGCAATTCCAAAGGTATTCCTTAGTCAGGCAGCAAACCTTAAAAACCTCAATCTCAACAACAACCAACTCAAGATTCTTGACGTCCAGGCTCTCCCCTTGCCATTCCACAAGGGTTGTACTTTCATTCCCGGTGGGCAGCATAAAAACAGGTCCTCCTGCAAACTTGTCCTACATGCCAATCCTTTTACTTGCAGTTGTGTTATTTCAGGAT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa10328
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124218 Nonsense 732 1069 2 2
Genomic Location (Zv9):
Chromosome 8 (position 55866019)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53901683
GRCz11 8 53731403
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCRTACTTRCCYAATATTAACWTTGAGCTCCRKCTCACAGGACTGGATT[T/G]AAGTCACAACCGACTGGTTGCAATTCCAAAGGTATTCCTTAGTCAGKCAG
Long Flanking Sequence:
TCAGGAGGTCAGTGGCACCCTAAAGGCTCTTGACCTCAGCAATAACGAGTTCCACTTTATAATGAAGGGAATGGGGCATCAGTTCACGTTCCTCACGCACATGTCGTCTCTTATAATACTAAGTCTAGCAAACAATCACATCGGTCTCCGGATCTCAAACATCCTCACCAGCGCTTCTCTGAAGTATCTCATTTTCTCTGGGAATCGTTTGGACATATTGTGGGACTCTTGGCGTAATCAATACATAAACCTCTTTCAGGGACTCACCAACCTTACGCACTTGGACATCTCTGAAAATCAGCTCAAATCTCTCTCCCCAGAGGTAATCGTGAACTTGCCTTTGAGTCTCCAAGTTCTCCGAGTCGACTTCAACATGTTGACGTATTTCCCGTGGGCAAACATCTCAGTTCTCCAGCAACTCTGCTACCTCAATCTGAGTTCAAACATGCTTTCGTACTTGCCCAATATTAACTTTGAGCTCCGTCTCACAGGACTGGATT[T/G]AAGTCACAACCGACTGGTTGCAATTCCAAAGGTATTCCTTAGTCAGGCAGCAAACCTTAAAAACCTCAATCTCAACAACAACCAACTCAAGATTCTTGACGTCCAGGCTCTCCCCTTGCCATTCCACAAGGGTTGTACTTTCATTCCCGGTGGGCAGCATAAAAACAGGTCCTCCTGCAAACTTGTCCTACATGCCAATCCTTTTACTTGCAGTTGTGTTATTTCAGGATTTGCCAAATTTCTTAGAGAAACCGATTTGGATGTGCCTCATCTCACTACACAGGTTCACTGTGGTTTCCCGGAGTCATTAGCCGGCGTGAATGTCCTCTCGGTGGATCTTCGCTCATGCCAGGAGATATTCGGAGGAGTCGCCTTCCTCTGTACTTCACTATTGACACTAGCAGCAACTTGCGTTCCTCTCCTGAAGCATCTCTACGGCTGGGATTTGTGGTATTTAATCCAGATTCTGTGGACTGGACATCGGGGACACACTCCAGCTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12600
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124218 Nonsense 1045 1069 2 2
Genomic Location (Zv9):
Chromosome 8 (position 55866959)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53900743
GRCz11 8 53730463
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGTCAGTTCTGTCCTGGCCCAGAAAYCCMYGAGTGCAGCCGCTCTTCTG[G/A]AATGACCTGCGCGTCGCTCTCGTTTCTGACAATRTTAGAGCCTACAACAA
Long Flanking Sequence:
TGGGATTTGTGGTATTTAATCCAGATTCTGTGGACTGGACATCGGGGACACACTCCAGCTAATGGCAACCCCACGGACAACCAGTATGATGCATTTGTGGTCTTCGATACCAGTAATAAGGCAGTCAGGGATTGGATCTACAAGGAGATGCTTGTGAGATTGGAGAACCGGGGAAGATGGCGCTTTCAGCTTTGCCTAGAAGAGCGTGACTGGATTCCTGGAGTCTCGTGCATTGAGAATCTGCACAAGTCCGTTTACAGCAGCAGAAAGACAGTGTTTGTGTTGACCAGCCCTGGGGGTTATTCTGACGCAAGTGGAATAGTACGTCAAGCCTTCCTTTTGGTGCAGCAGAGACTTCTGGATGAGAAGGTGGACGTCGCTGTTCTGGTTTTGCTGGATTTTCTCTTCCCCAAATTCAAGTACCTTCAGATGAGAAAGCGACTCTGCAAGAAGTCAGTTCTGTCCTGGCCCAGAAACCCCCGAGTGCAGCCGCTCTTCTG[G/A]AATGACCTGCGCGTCGCTCTCGTTTCTGACAATGTTAGAGCCTACAACAAGAACGTCACGGAGAGCTTCTTCTGAAAACAGGGCCAGGAGCGTAACCTTATTTTAATTTAAAGAAACAAAATTTGGAGTCTAGGGGGGTCAGTTTCAAGCAGTTATAAACAATAATTGAGTGGTATTTTGAGCTTGAAGTTCACCACACGCTAAGAGACTTGTAAAAAGGGGCTTAAGTGGTCCCATGATTGGAATAATGTGTGATATATAGTCATATTGGGTACGTCTCAGTCAGTTCCCTTGCTCAGTAGTCAGTGCACTAATCAGGGAGTCAACTATTTTAAACAACACAGGCTCACTCTAAAAACATAGCTTTATATACAATTCTGGAGATCGTGAATTATTTAGCCAGAAGTACGTTTAGCCACATTACGTCTTTTAAATAAACGCTACTAGGCCATATGATGCCGTTCCTTTTAACACTTATCAGCTAACCACTTACCTCCGTA
Associated Phenotype:
Not determined