Busch Lab

ZMP

nfya

Ensembl ID:
ENSDARG00000042004
ZFIN ID:
ZDB-GENE-010501-1
Description:
nuclear transcription factor Y, alpha [Source:RefSeq peptide;Acc:NP_001076264]
Human Orthologue:
NFYA
Human Description:
nuclear transcription factor Y, alpha [Source:HGNC Symbol;Acc:7804]
Mouse Orthologue:
Nfya
Mouse Description:
nuclear transcription factor-Y alpha Gene [Source:MGI Symbol;Acc:MGI:97316]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa10216 Nonsense Available for shipment Available now
sa15592 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa10216
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099571 Nonsense 59 265 3 8
ENSDART00000103064 Nonsense 59 321 3 8
ENSDART00000122531 Nonsense 72 167 4 6
ENSDART00000125616 Nonsense 83 316 4 9
ENSDART00000140397 None None 218 None 6
Genomic Location (Zv9):
Chromosome 11 (position 37106509)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 36003737
GRCz11 11 36265720
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATCACTTCCTCTGGGCAGCCCATAATGGTTCAGGCCATGACARGAGGA[C/T]AAGRTCAAACCATTATGCAAGTACCGGTATCTGGTACACAGGGGCTGCAG
Long Flanking Sequence:
ACCTTGTATCTCATGCATTGCTATCCTTATTTGTATTATTATTATTATTTTTTTATCTTTCTCAGTACTATTACAGTATTATGAATATCATTTGCTATGATTTTCAAAAAATATCCAAATAATTCCCACAGGAATGACTTTAAAGCATGCTTTTTTTTGTGCAAATTGCATTATCAAACCCCCAGCAAGTCCAGTGCCACCAACTTCTTGCATTTCACATGCACTGCATTTTCTTGCATGCATCTACGTTTTGCATCATCTCAGTGTCTATCATAATGTCATCATGAAATTAGCATTTAAAAGTTACTATTATTCTCATTATAACGTAAGTAATGGAAGCCTGAGAAGTCTAAGAAGTAAATTGTGTTTTAGTACTGACATTTTTTTTTCATGTATTTTCTTCAAAGGTCCAAGGGCAGCCTCTTATGGTTCAAGTCAGCGGCGGTCAGCTCATCACTTCCTCTGGGCAGCCCATAATGGTTCAGGCCATGACAGGAGGA[C/T]AAGGTCAAACCATTATGCAAGTACCGGTATCTGGTACACAGGGGCTGCAGCAGGTGAGTGAAGCTAATTTCAAATTCAGTTACTTGATAAAAATGCAGTATTTACTTTTTTTTTTTTACTTTATGCACTTTAATACTTCAAGGCAGTGTTGGGGGTAATACATTACAAATAACGCAAGTTATAAATAACGCAACCAATAAAGTATTACTTTTAAAAAATAAGTCATATTTGAGTTTTTTTTTTTTTTTTGAAAATGTAACATGGGTTACTTTTTAGTTTATGTATTGAGTTTTTAAAAAAATAAATTGCTGAATTAAAATGAAAGTAATCACGATGAATCACGTTGGATCAATGAGGGAATGTCTTTATTATTTTGAACACATTGAAGAAAAAGAAAATGGCATTGTCTTAATGGGCAGTGATTTTACTTAAGACAAATAGTACAAAAGTAGCAAACACATTGCATTACATTTTCATTAATCTGTATATATGGCATGTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15592
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099571 Nonsense 79 265 4 8
ENSDART00000103064 Nonsense 79 321 4 8
ENSDART00000122531 Nonsense 92 167 5 6
ENSDART00000125616 Nonsense 103 316 5 9
ENSDART00000140397 None None 218 None 6
Genomic Location (Zv9):
Chromosome 11 (position 37104747)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 36001975
GRCz11 11 36263958
KASP Assay ID:
2260-4556.1 (used for ordering genotyping assays)
KASP Sequence:
NNNNTACTGGGGATGAAGTTATAATGAAAANCCTCTATGTTACACAGATTCAGT[T/A]GGTYCAGCCTGGTCAGATTSAGCTTCCTGGTGGACAGACTTTACAGCTAC
Long Flanking Sequence:
GACTAGGTTTAAACAGGCCCTAACAAACAACTTGACAGTCAGTCATTGTGAGCATGGAGTCACAAAAGTTAAGAACCCCTCAGTATAAAACTCCAGCAAGATACTGGGGATAGGTGGCACGGTGGCTTAGCGGTTAGCACACCTCACAGCAAGAAGGTCAATGGCTGAGTCCTCCCTGTGCCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTCTGTTTGCTTGGGTTTCCTCCAGGTGCTCCGATTTCCCCCACAGTCCAAAGATGAGGTATAAGTGAATTGGATTCATTAAATTGGCCGTTGTTTGCATGAATGAGCGTGTATGGCTGTTTCCCAGTATGGGTTGCGGCTGGAAAGGCACCCACTGCATAAAAGATATGCTGGAATAGTTGGTGGTTCATTCTGCTGTGGACCAAGCTAAAGAAAAATGAATGAATGAATGATACTGGGGATGAAGTTATAATGAAAAACCTCTATGTTACACAGATTCAGT[T/A]GGTTCAGCCTGGTCAGATTCAGCTTCCTGGTGGACAGACTTTACAGCTACAGGGTCAGCAGGGTCAAACTCAACAGATCATCATTCAACAGCCACAGACCGCAGTCACTGCAGGACAAAACCAGGTATTGTACTTATGCAGATTTTTTAATTTTATCATAAATATGAAAGCACAACAATCTATTTAAATACCCATTATCAATGAAGTGCATAATAAATCCTGGTGCTTTCTGATTTTTTTAGGGTCAACAGCAGATTACAGTACAAGGTCAGCAAGTGGCTCAAACCGCTGAAGGACAGACCATCGTATACCAGCCTGTAAATGCAGACGGGACCATCCTACAGCAGGGTAAACCCAGAAAAACTAAATTAACAACGATAAAATGTGTTTATATCAGTCGATACTGATAATTATCTAGCTAAATTTTACATTTCTATTTCTTTTAAGTTTAAAGGGGATTTTTGCTGCTGAATGAATGTTTTAGAAAGCAGTCTGTTCAT
Associated Phenotype:
Not determined