ZMP
usp28
Ensembl ID:
ZFIN ID:
Human Orthologue:
USP28
Human Description:
ubiquitin specific peptidase 28 [Source:HGNC Symbol;Acc:12625]
Mouse Orthologue:
Usp28
Mouse Description:
ubiquitin specific peptidase 28 Gene [Source:MGI Symbol;Acc:MGI:2442293]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa43643 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa18009 | Nonsense | Available for shipment | Available now |
sa1020 | Essential Splice Site, Missense | Available for shipment | Available now |
sa23935 | Nonsense | Available for shipment | Available now |
sa16609 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa43643
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000003076 | Nonsense | 302 | 1163 | 10 | 26 |
ENSDART00000147896 | None | None | 1041 | None | 23 |
Genomic Location (Zv9):
Chromosome 21 (position 22213188)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 23061601 |
GRCz11 | 21 | 23098206 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATGCAATTGTGTGCAGGAGAGATTGTGTCCAACATCGAGCAATTCGGA[C/T]AATACCCTCTCCAAGTGAACGGCTTCAATAATTTAGATGAATGTTTGGAG
Long Flanking Sequence:
ATTTTAAAAACAGTGGGACTAGGATAAAGCTTTTTAATGGTTTGTTTAAAATCATTTTATTGCCATCTAACATGCATCATCTGCTTGCAACATTAAGAAAATGTGTTTGTTACCCCGAGGCAACATCTTGCTGTAGAGTGTTAATTAATAAATGGTAATGAGTGCAGCATTTGTTAAAGAATCATGAATAATTACCCTATGGTATATTTGGTTGCTAATGTACTTGCCAGGAATTTTTTTTCTTTTTTTTTTGTTTTTTTTTTGTTTGGTCTCTGAAAATAAAACATGGCAGCTGTTATTTTCAGTAACCCAGAGGATAAACAAAACAACCCCATGGTCCAGCTGTTTTATGGCACATTTGTGGCTGAGAGGCTTCATGAAGGTAAGAGAATGACATTTCTTCTGTAATTATTCTGTATTTATCACCCTCATTATCGACGATATTTACATGCATGCAATTGTGTGCAGGAGAGATTGTGTCCAACATCGAGCAATTCGGA[C/T]AATACCCTCTCCAAGTGAACGGCTTCAATAATTTAGATGAATGTTTGGAGGGGGCAATGGTTGAGGGAGAGATTGAGTCTCTTCATTCAGATCAGACACTCTCCTCCGGCCAAGAGGTCAGTTTTACCTCGTGCTACAGTTGTATGGACGTCGTGGGTTTATTTATTAATGTGAAGTATGCACATGCTGCTATTATGGATTCAGGTTTGTGTCTTTGTTCACAGAGGTGGTTCTCCAAGCTGCCGCCAGTGTTGACCTTTGAACTGTCCAGATTTGAGTTCAATCAGTCTTTGGGGCGACCCGAAAAAATACACAAAAAACTGGAGTTTCCCCAAGTGATCTACATGGACAGGTTAGAAAAACAAATCTTGTTGACAGTGTAAATTGTTCAGTGTTCATTACTACAGCTTCTTTATTTGTTTGTTTGTTTGTTTATCTTTTTATATAGAAATGGATTTATGTACTTTTAAGTCATGGTTAACATTGTCCAACATCATTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18009
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000003076 | Nonsense | 365 | 1163 | 11 | 26 |
ENSDART00000147896 | Nonsense | 243 | 1041 | 8 | 23 |
Genomic Location (Zv9):
Chromosome 21 (position 22212891)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 23061304 |
GRCz11 | 21 | 23097909 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGTGTTGACCTTTGAACTGTCCAGATTTGAGTTCAATCAGTCTTTGGGG[C/T]GACCCGAAAAAATACACAAAAAACTGGAGTTTCCCCAAGTGATCTACATG
Long Flanking Sequence:
ATTTTCAGTAACCCAGAGGATAAACAAAACAACCCCATGGTCCAGCTGTTTTATGGCACATTTGTGGCTGAGAGGCTTCATGAAGGTAAGAGAATGACATTTCTTCTGTAATTATTCTGTATTTATCACCCTCATTATCGACGATATTTACATGCATGCAATTGTGTGCAGGAGAGATTGTGTCCAACATCGAGCAATTCGGACAATACCCTCTCCAAGTGAACGGCTTCAATAATTTAGATGAATGTTTGGAGGGGGCAATGGTTGAGGGAGAGATTGAGTCTCTTCATTCAGATCAGACACTCTCCTCCGGCCAAGAGGTCAGTTTTACCTCGTGCTACAGTTGTATGGACGTCGTGGGTTTATTTATTAATGTGAAGTATGCACATGCTGCTATTATGGATTCAGGTTTGTGTCTTTGTTCACAGAGGTGGTTCTCCAAGCTGCCGCCAGTGTTGACCTTTGAACTGTCCAGATTTGAGTTCAATCAGTCTTTGGGG[C/T]GACCCGAAAAAATACACAAAAAACTGGAGTTTCCCCAAGTGATCTACATGGACAGGTTAGAAAAACAAATCTTGTTGACAGTGTAAATTGTTCAGTGTTCATTACTACAGCTTCTTTATTTGTTTGTTTGTTTGTTTATCTTTTTATATAGAAATGGATTTATGTACTTTTAAGTCATGGTTAACATTGTCCAACATCATTACTATTGATTTATTTATTTTCATATTTATTATTATGAATGTCCCTGTTTGTCTGGTTTTAGATTGATGTATGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTATTGACTGATTTATTTTATTTTAATTTATTATCTTATTTATTGATTTATTTAATTTAATTTGTTTTCTTATTTATTCATTTAATTTATTTAATTAATTTATTTATTTGCTTGTTTATCTTTAGTAGCAGACTTTATTTTATTATTTATTTTATTTATCAGTTTATTTATTTATTTGCCCATTTTTTCATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1020
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000003076 | Essential Splice Site | 466 | 1163 | 14 | 26 |
ENSDART00000147896 | Missense | 344 | 1041 | 11 | 23 |
Genomic Location (Zv9):
Chromosome 21 (position 22210496)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 23058909 |
GRCz11 | 21 | 23095514 |
KASP Assay ID:
554-0924.1 (used for ordering genotyping assays)
KASP Sequence:
GTTTTCTCCTCTGTGTTTGTCCRCCTCTAAATGTTTAATTTCTTGTTGTA[G/A]TCAAACAGAAGCAGATGATGCCGGCTCGTCAGATGGTTCGGGCTGCCCGC
Long Flanking Sequence:
GAACTATCCCTTTGAGAGCATATAGTTCAGTGGTAAATAGCAATTCTTTACATTTTGTACACAGATACCTTCACAAAAATGTCAATCAGACTCACGGCAGGAGAGGAGAGGTCAAGAGACTCAAGGACCAGTTAACACTTCTACAGCAGAAGCTTGAGGGGTATGTTTATTCCCTGCAACATATTGAGTAATCTATAAATATTGCTCTTCCTGGTTTAAAATATAACTTTCTTTTTAAAGATATAAAAACTACGGCTCAGGGCCAGCCAAATACCCTCTGGCAGACATGTTGCAGTATGTCCTAGAGTTTGCCACCACAAAACCCACAAATCCAGGTTCACCAGTACCTACAAACCCTCCCATAAGCACAGATCCCAGCTCAGGTGACAGCAGGCAAGACCCACTTTCCTCAGCTCTCCTTCATCCGTGGATAAACTGTGCCCATTGTTTGTTTTCTCCTCTGTGTTTGTCCGCCTCTAAATGTTTAATTTCTTGTTGTA[G/A]TCAAACAGAAGCAGATGATGCCGGCTCGTCAGATGGTTCGGGCTGCCCGCCGACAGCGACGCAGAGAACGCCCATCCACAAGCCTTTTACTCAGTGCAGACCCCCTATGGAGGTGCCAGTGCAGCCGGCGCCACACAGCGTGAGCGAGGAGGAGCTGCACTTCATCAGGAGCTGCTTACAGCGCTGGAGAGCTGAAGTGGAGAACACTATAAGTGGTACATCCCTCACTGGGTCAAGGATGCTTTTCTTACTATTACGCTTCCATTACCTTGTTTTGAAGTGAATATATATACAGTTGAAGTCAAAATTATTAGCCATCCTGTGATTTTTCTTGTCTTTTTTAAATATTTCCCAGATTATGTTTAACAGAGCGCAGGATTTTTCACTGTATTTCCTGAAATATTTTTTGCTTCTTAATAGGTCTATTTCCCAGAGATGGGTTGCAGCTTAAAGGGCATTCGCTGTGTAAAAACATGCTGGAAAAGTTGGCGGTTCATTCC
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa23935
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000003076 | Nonsense | 960 | 1163 | 22 | 26 |
ENSDART00000147896 | Nonsense | 838 | 1041 | 19 | 23 |
Genomic Location (Zv9):
Chromosome 21 (position 22170867)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 23019280 |
GRCz11 | 21 | 23055885 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTCTTCACAGGGCCGTCAGCATCATGAGAGAGGCCAGATCGAAACTT[C/T]GACTAATTAGACCAGAAGATATGGACATGGATGAGTATTTGGTAAAATCA
Long Flanking Sequence:
CGGAGCTAAACAAACAGTGATGTAAAAGCAGGCGGAGTTTAGTCACTCCGTTATTAAGTAATAAAGAGGCTCATTCCACCCCCATAAGCTGTTTTCAGGCTAACAAGGAAGCTCTGAATTCTGAAACTTAAGAGATGTTTGTGTAGTGCTGTGACATCTTATATGTCAAAAGGAAGTTTATTTCGCATGTCCTATTTGAGATTGACTATTTAGATGAATCTAGTTAATCTAAATCTAATGTAATCATGTCTTTTTCTACATATAATTAAGATACTGTGTGCTTAATTAGAAGTAAAATATTTTGTTTTTGCAATGCCACATTTGTTAGAGTTTTGCACTTTGTCACATGAGTCTGAAAGCTTTGTCTGATAAACCCCTAAGTTTGACAATGTAGTTTCTCTGTTCGTGTCACATTTGAGATAGACTGTTTAGATTAATCTGCACTGGATGTTTCTCTTCACAGGGCCGTCAGCATCATGAGAGAGGCCAGATCGAAACTT[C/T]GACTAATTAGACCAGAAGATATGGACATGGATGAGTATTTGGTAAAATCAATGAGACTCACTAATCTAAAAATAAAATACATTCATACTTATATCATCAAGGATGCATACAAATGTTGATCGAAAGAGACTTCTTTCTTATACGCTTTTACGAAACCTCACTCTCAATCTATTGAATGTTAATGTCTGAATTTGACATTGTTGAAGAGTAGCTACTGTAGAAACAAGTTGCACCGTTACTAGCTGAGCTACCTTTTTGGTCACACTTTTTTTTAATGGTCCGTTTGTTGAATTAAGTTACATTACATCTACATGCCAACTAATTCTCATTAGATTATAAGTAGACTGTTAGGTTGGGGTTAAGGTTAGTGTAAGTTGATATGTACTTGCAAAGTCAGTTCTTTTAGTCAGTGAAATGTGTTAAAGGAGCAGTATCAACAGATATTAAGCAGACAGTCTACTATTACTCAAATGGACCATCAAAATAAAGTGTTACCACAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16609
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000003076 | Nonsense | 1069 | 1163 | 25 | 26 |
ENSDART00000147896 | Nonsense | 947 | 1041 | 22 | 23 |
Genomic Location (Zv9):
Chromosome 21 (position 22167524)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 23015937 |
GRCz11 | 21 | 23052542 |
KASP Assay ID:
2261-5620.1 (used for ordering genotyping assays)
KASP Sequence:
AGTCAGGATGAGAGTGACGTGACGGAGGGAGAGAGCCTCATGAATGAGTG[T/A]GYGATCCCTTGCATGCACCTCATGGTTCGAGACAGTGTCAGCCAAGAGGA
Long Flanking Sequence:
TGTTTTATATTAGTGCATATTTTACAATAAATACTATTTTTATCATTTAGTTAAAAACAAATTATATTTTATTCATTGTTGTGATTTCTGTTTTATTCTGATTCATGTATTAGCAATTTAAACTTACAAAAAGTAAAAAAAAAAAAACAAGTCTGATTCTTTAAAAATGATTGTAAACACTTATTTGTGCCTAGAAATGGTTTCTTATTGTCAGTGTTATAAACTGTAAAAAAGAAAAAAAAAAGTTTGTTTCGGAAATCTTTGATGAATTAAGTATAATATATGTATATAATATAAGTAAATAGTACTTATTTGAAACATTATTTGGTCTTCATTTCTAATTTGAAGAATTTAGGGCTCAAGCTTTACACAAAGACTTTTTAGGTTCAACTGATACATTTGCACTCTGATATGCAGGAGCTGAATGAGAAGGCAGCCACGCTGTTTAAAAGTCAGGATGAGAGTGACGTGACGGAGGGAGAGAGCCTCATGAATGAGTG[T/A]GTGATCCCTTGCATGCACCTCATGGTTCGAGACAGTGTCAGCCAAGAGGACCTGGATGTCATCGAGCTGATCAGGAATTGCTGGTGCTCCTACCTGGGGCAGGACATGGATGGTGGGCTTTTTCACCATTTCAATTAGATCAAGGATTTTTAAACTGTGGTCAGGAGGCTGCAAGAGAGGGCCTTTGGAAATGTAAAAAAACTGAATAGACACTTAATAGAAAAGTTTTTTTTTTTTTTCAAAATAGTAATAAATTAGTTAATAAGATGTATTAAAATAATAATACAATCATATTTTTAACTTATTTATATTTATGAATATATTTATAATTAATGAAATACTTAATAATTGTTTAATTGGTAAATATAAACTGTAATAAAAGAAACAAACATACACTGTACCTACAAATTACTTTCAAAGAAATAATTATACTAATTCTGAAATCATTTAGGGCGATGCGGTGGCACAGTGGGTAGCACGTTTGCCTCACATCAATAAGG
Associated Phenotype:
Not determined