ptprdb

Ensembl ID:

ENSDARG00000019945

ZFIN ID:

ZDB-GENE-070615-38

Description:

protein tyrosine phosphatase, receptor type, D isoform 2 [Source:RefSeq peptide;Acc:NP_001092239]

Human Orthologues:

PTPRD, PTPRS

Human Descriptions:

protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668]
protein tyrosine phosphatase, receptor type, S [Source:HGNC Symbol;Acc:9681]

Mouse Orthologues:

Ptprd, Ptprs

Mouse Descriptions:

protein tyrosine phosphatase, receptor type, D Gene [Source:MGI Symbol;Acc:MGI:97812]
protein tyrosine phosphatase, receptor type, S Gene [Source:MGI Symbol;Acc:MGI:97815]

Allele Name	Consequence	Status	Availability
sa10181	Nonsense	Available for shipment	Available now
sa19469	Nonsense	Available for shipment	Available now
sa16499	Nonsense	Available for shipment	Available now
sa14902	Essential Splice Site	Available for shipment	Available now
sa19468	Essential Splice Site	Available for shipment	Available now
sa19467	Nonsense	Available for shipment	Available now

Allele Name:

sa10181

Status:

Available for shipment
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Availability:

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Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000089132	Nonsense	265	1869	5	32
ENSDART00000127145	None	None	205	None	5
ENSDART00000131579	Nonsense	294	1934	7	34
ENSDART00000143663	None	None	205	None	5

Genomic Location (Zv9):

Chromosome 1 (position 17935242)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	18500410
GRCz11	1	19193347

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ATTGGGCRAAATGTYCTGGAGCTCACCAACGYACGCCAGWCTGCCAACTA[C/A]ACGTGTGTCGCCATGTCTACACTCGGAGTTATAGAAACTGTTKCCCAGAT

Long Flanking Sequence:

TTTCTCAAAAAAATGTCTGTCACTTCTCTCATGTTCATCTCTAAATCACTGGCATGTCTATTTGATGAGATGTTTTTTTAATCATATATTCACATTACAAAGAAACAACATAGTTCGGCACATTAAAAAGCAACCCAGCCACATCTTACCTCGCTCTTCTCTACAACACAGATTGCTAACCTGCAGTATACAACATCACAAGTGTTCATCTGTCATACAGAGTGCTCTCTGTAGCATCAATAATGTCTTTAGCATGAGTTAATAAATGGCTCTCTGTCTTTCACACCCTCAGTGCGGCGAATCCCTCCTCGATTCTCTGTGCCACCGATGGATTATGAGATCATGCCGGGAGGAAGTGTGAACATCACCTGTCAGGCGGTGGGGGTTCCTATGCCATATGTCAAATGGATGCTGGGAGCCGAGGATTTGACACCAGAAGACGACATGCCTATTGGGCGAAATGTTCTGGAGCTCACCAACGTACGCCAGTCTGCCAACTA[C/A]ACGTGTGTCGCCATGTCTACACTCGGAGTTATAGAAACTGTTGCCCAGATCACAGTTAAAGGTACACAGGAGGGATGTTAAAAGACTCTTTGAAGATGTTTAAAGGGATAGTTTATTGTTTATTAACCTTTCACTTCTTCTAAACCTTTTTGAATTTCCTTCCTCCGTTGAACACAAAATAAGATTTATTGAAGACAGCTGGAAACGTGTAACTGCTGACTTTCATATTATTTGTTTTTCTATTATGGAAGTCAGTAGGTACAGGTTTTCAGTCTTCTTCAAAATATCTTCTTTTGTGTTCAACAGAAGAAAGGAACTCATGAAGGTTTAAAACTAGGGTTGGGCGATCTTGACCAATTTGACATTGTACAATATCTAATGTGAATCATCACGATGGACGATGGCATCGTCGTTGTAGGCAGCGGTAAATTAATTATTTTTAAATAATTAATGAATCCATAACAAATTAATTATTTGTAGCCTATTGTTTCAACCACCTG

Associated Phenotype:

Not determined

Allele Name:

sa19469

Status:

Available for shipment
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Availability:

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Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000089132	Nonsense	990	1869	14	32
ENSDART00000127145	None	None	205	None	5
ENSDART00000131579	Nonsense	1055	1934	16	34
ENSDART00000143663	None	None	205	None	5

Genomic Location (Zv9):

Chromosome 1 (position 17911075)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	18476243
GRCz11	1	19169180

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTGAACTTCAAAGTGAAAGCTGCAATGAAGAGTTCAGTTCTGCTGACCTG[G/A]GAGTCTCGAACCACCAGTAATAAAGCGCAGTCTCTCATCGTAAGAACTAC

Long Flanking Sequence:

TCAGGCAACCATTCATATACAAAACTTTTCTTTGGAAGGCCATTTTCTCTTTATGTCTGGTCATTTCTGTGTGTTTTTGTTGGTCTGAGTCTCTTGTTTGATGGCGTCCATTAAGCACAAGGTGAGAATCTTTCTGTAAATGGGTTTAAGTCAATGTTGGAGTGCTCCATTATCTCATAAAACAACTACAGTAAAGGTGAGCTCTTGGAAAAGAGTGACAAATTCTTGTCAGTACCATGAAAAAAAGAGGGACTATGTATTTTTCCTGCTGTCAGATAAAGTAACATCCTGATGTAGGAAATGATTTTAAAAGAAACCGTTGAAGAGATTTGTTGACGTTCTTCATAAATGCTTCAGCTTTGATGGAGGCCAGAGGTTGTGCTCAGGTGAGCTGAAGTATTGATGTGTAATTTGTTGATCTTTGTTTTTCCCCTTTTCATAGTTTTTGCTGTGAACTTCAAAGTGAAAGCTGCAATGAAGAGTTCAGTTCTGCTGACCTG[G/A]GAGTCTCGAACCACCAGTAATAAAGCGCAGTCTCTCATCGTAAGAACTACACTTATAATATGTGTTTGTTGTGTGTATGTGTGTGCTTGTGTTGGTTCATTAATTTCCTTTGGCTTAGTCTCTTTATTCATCAGGGGTCGCCACAGCAGAATGAATCGCCAACTTATTCACCATATGTTTTACACAGCGGATGCCCTTCCAGCTGCAACCCATACTGGGAAACATCCATATACACATTTACACACATACGCTAAGGCCATTTTAGTTCATCCAATTCACCCCTACCGCATGTTTTTTGATTGTGGGGGAAACCGGAGCACCCGGAGGAAACCCACCCATAGTGAGAACATGCAAACATCAGACAGAAACGCAACTGGCCCAGCCGGGACACGAACCAGTGATCTTCTTACTGTGAGGCGACCGTGCTAACCACTAAGCCACTGTGTTGCCTAAAGCATTTAAAATAAAGCTATATTTAAATCTCACACCTGATATAGAAA

Associated Phenotype:

Not determined

Allele Name:

sa16499

Status:

Available for shipment
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Availability:

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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000089132	Nonsense	1036	1869	15	32
ENSDART00000127145	None	None	205	None	5
ENSDART00000131579	Nonsense	1101	1934	17	34
ENSDART00000143663	None	None	205	None	5

Genomic Location (Zv9):

Chromosome 1 (position 17905976)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	18471144
GRCz11	1	19164081

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GCAGAAGTTAGTGACTAAGCTAAAGCCTCARTCTCTGTACAACTTTCTRT[T/A]AACCAGTAAATCCGACAGCACTGGAGGCCTGCAGCACCGCACGGACGCCA

Long Flanking Sequence:

GTAGTGAGTTTGTATTTTAATCTTTACCTGTTTAAACTTTTTTTTAAAAATCGAATTGTTTGAAATCATTCAAAGTCATCTTTTAAGTGTTCAGAGGCCCTCTAGTGGTATCTAGACCCCTTGTTGAGAACCACTGGGTTAGGTGATGAATTGTTTCATAAGCTTAGTATTAAATCAAGCTTGTGACTGTGTGTGTCTGTGTCACCACCTCTTCATGCAGCATATTGAGACTGAATTGTGTATGACAGTGTTTGTTTAAGTGTGAGTGTGTGCATGTTAGCAAGTGTCTGAGGTGTCAGTCTAAATCTTTCTCTGCTCTCTTTATGTGTGTGTGCCATAAGATACTCATAGTTTGACTGTCAAAGTGTGCATTTAATGTTTTCCATCTTTCTTTCTTTGTCAGATCTCATATGGCGATGGCGAGAGTGTGGAGGTCGATGGGCGGCTCGGGCAGAAGTTAGTGACTAAGCTAAAGCCTCAGTCTCTGTACAACTTTCTGT[T/A]AACCAGTAAATCCGACAGCACTGGAGGCCTGCAGCACCGCACGGACGCCATGACGGCTCCAAACCTGATGACCAGGAAACCACAGCTGCTGGACAAGACCAGCTCGCAGAGCATTGCCATTCTGCAGCTGCCCACTGTACAAGGCCAGGCTAACGTCAGGTCAGGGAAACTCCAAAACATATACAGGGAGAATTAACATTAGGTTCTAAATTACTTCTCAAACTTATAAATCTGGAAAAGAATTAGGATCTGAGGATTCTGAAATATAAGCAGAGAACTAAAAAATAATTAACTCAGAATTCTATTGAAAACTCTGAGTTTTGAAGTTGTTAAAGTTTTACAAAGTTATGACAGTTACTTGAATGAATTTTATTCTGAATTAGTCAACATTTCTATTCAATAAATTACTGATAAATTAATCTTTAAGAGTAAATATTATATTACTGTATTTTCAGGAAATAATTTGTACCTGACTGTAAGTTTCACTTTGTAAAAATCGC

Associated Phenotype:

Not determined

Allele Name:

sa14902

Status:

Available for shipment
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Availability:

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Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000089132	Essential Splice Site	1244	1869	18	32
ENSDART00000127145	None	None	205	None	5
ENSDART00000131579	Essential Splice Site	1309	1934	20	34
ENSDART00000143663	None	None	205	None	5

Genomic Location (Zv9):

Chromosome 1 (position 17901104)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	18466272
GRCz11	1	19159209

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GCYGTCATCTTCATCATCAGCRTCGTCATCCTCATYCTCCTCTTTAAAAG[G/A]TGAGACAGACAAGAYAAATCAGCAGAAAGTGAGATTTAAWGAGTTRAACC

Long Flanking Sequence:

AAGACATCTCAAACAATGTCTTCTTTGCATTTAAATTAACAAAACTGAGCGAATGACACTTAATGACAGCTGTAATAAGCATGCATACATCTAATTCATATTCATAAAGTTTTATGTAATAATTAAAAAATTGTCATGAAAGTATTATGAGCAGCCCCTTCAAGTGTCAACCAAATGGATTTATTAAAAATAAAAAACACATGCAAATAAGCCATAAAGCATCTTATATTGTAGATATTGTGCTGTAAAAATAATTTACAGCACAAAAAAATAATTATTTTTTTAACATATTTGAAAATACTGTATATTTATGCTAATGTGCTGATCTTTGATTGACAGACTGTCTACTCCACAAGCCCATTCTCTGATGCGGTGCTCTTCTCTGATGTGGAGCCACAGCCAATCGTAGATGAGGAGGAGGGACTTCTGTGGGTGGTTGGACCAGTGTTGGCCGTCATCTTCATCATCAGCATCGTCATCCTCATCCTCCTCTTTAAAAG[G/A]TGAGACAGACAAGACAAATCAGCAGAAAGTGAGATTTAAAGAGTTAAACCACAGTTAAAGAGGATTTTAGATTAAATGACAAATGCACGATGCAGATATGTTCAGTGTTTCATTGCTGTAAGGCCTAAATTTCCTAATCCTTTAAAGTCTTTTAAAAGCGAGTTTTAAAATTTCAGATGGAAAATATATATATAAATATATATATAAATGAATATACTTTTTATTAAATGTGCTACACTCTAAAATGAATTTGATTTAATCTGCTACTATAGAGCAGTGACGTGTGGTGAGGTTTTTGGCTGGTGAGGCATTGACTCTTTCTAAGTCAAGAGTCAGATTTACAAACATATTCACTCGATATATTTTCCAGCTGCCGAATGTGTTTCATTTATAATACCAGCATTCTTTCTATACTCATGGCAGGTACATATCGGGCCAAGAATGCAAATTGTATAGCGATTAAATATCCCTCCCAAAAACACCCAGCTGTATGCTACAGA

Associated Phenotype:

Not determined

Allele Name:

sa19468

Status:

Available for shipment
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Availability:

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Mutation:

A > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000089132	Essential Splice Site	1607	1869	27	32
ENSDART00000127145	None	None	205	None	5
ENSDART00000131579	Essential Splice Site	1672	1934	29	34
ENSDART00000143663	None	None	205	None	5

Genomic Location (Zv9):

Chromosome 1 (position 17872644)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	18437812
GRCz11	1	19130749

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TATATCTGTTCATTAAATGATACAGATGTTTGTGTGTGTGTCTCCTTTTC[A/T]GCGGTTAGCTAATGCCAAAGCGCATAACTCCAGATTCGTCAGTGCCAGCC

Long Flanking Sequence:

GTTTTAATACTTAAAATATTGATTATTATATTATTTGCTGTTGCTGGCGGCTCAATTTTGGTTTGTACACTGTAAAGAAAATTAGCTTTTTTTTTTTTAGTACAAATATTTAAAAATTCTTAAGTCATAAAGCATTTCTACATGCAAAAAATATTGTCTCATAATATGCAAAAATTAAGTAATAATCTAAATAAGACTAAATAATCTGCCAATGGGCTAAGCAAAATGATTTTATGCCAAAACAAAAACATGATTAATTTGCTTACCTCATTGACAGATTATTGTTCTTGTTTTATGGAAAAACTCACTTAATTTTGACATATTATTTCTTAAAACAAGACTATATTTTTGGCTCATCTAGAAAATGTTTCTTGATTTAAGAATATTTAGATGTTTGGACTAGAAACAAGACAAAAAATCCAAGCAAGAAAAGCATTTTTTGCAGTGTAATATATCTGTTCATTAAATGATACAGATGTTTGTGTGTGTGTCTCCTTTTC[A/T]GCGGTTAGCTAATGCCAAAGCGCATAACTCCAGATTCGTCAGTGCCAGCCTTCCATGCAATAAGTTCAAGAACCGGTTGGTGAACATCATGCCATATGAGAGCACACGTGTGTGTCTGCAGCCAATCAGAGGAGTGGAGGGATCTGACTACGTCAATGGCAGTTTTATAGACGGCTACAGGTACAACGTCATCTCGCTTCTCATTTCTTTATATAAATAAAACAAATGTTCTCAATTCTTTGTTTCTTCCTCATCTCTCTTCAGGCAACAGAGGGCGTATATTGCGACTCAGGGGCCACTGGCAGAGACAGTTGAAGATTTCTGGAGAATGCTTTGGGAACACAATTCTACTATAGTAGTTATGCTTACTAAACTCAGAGAAATGGGAAGGGTTAGTAGACACATGCGCACAAACACACACACACAACAATGACGTTCAGATGCTGTCATATATGACAGTAGCAGTGCGATATGGCAGTATATCGGCACTGGTGAGAGGT

Associated Phenotype:

Not determined

Allele Name:

sa19467

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000089132	Nonsense	1753	1869	30	32
ENSDART00000127145	None	None	205	None	5
ENSDART00000131579	Nonsense	1818	1934	32	34
ENSDART00000143663	None	None	205	None	5

Genomic Location (Zv9):

Chromosome 1 (position 17869989)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	18435157
GRCz11	1	19128094

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTTGAAATGCTGATGTATCTTATTGGTTTTTCTCTCTCTTTAAGGATGGA[C/T]AATCCAGAACAGTCCGGCAGTTTCAGTTCACGGATTGGCCAGAGCAGGGT

Long Flanking Sequence:

AATTTTTCTTATGAAAAATATGAGCATGGAGTGAATACACATTTTCTGATTGTTAAATTCATGTATTTGATGGGTTTTGTAATCCATGTTAACACACTGTCTAATCTGTAGGTGCATTCTTGATTCTGAAATTCCTTCATACAATTCAGTATATAGATGCATGGAGAAAATCTGATTCTTTAAGTCATTTTTGTAACGATTCAGTCAAAATAATTGGTTTGCATGATTCATTAGCTTAGGAATTTCCACTTTTTAAGCATAAAAGTGAGTCTAAGCATTAAAAAATTCTAGGTTTTCTCAAATACATGATATAAATTTTTAATTTTCAACATGAATCAACATTACAAAATTATCCAACCCTTAAAACTCATTAGCTGGCAGGTTAGAAATTATTTAATAGTTATGAAAATTGTAATACAGTTTTATATAACTTTTCCACACAGACCCCTGGTTGAAATGCTGATGTATCTTATTGGTTTTTCTCTCTCTTTAAGGATGGA[C/T]AATCCAGAACAGTCCGGCAGTTTCAGTTCACGGATTGGCCAGAGCAGGGTGTGCCAAAATCTGGCGAAGGGTTCATTGACTTCATTGGTCAAGTGCACAAAACAAAAGAACAGTTCGGTCAGGATGGGCCAATCACAGTACACTGCAGGTGAGGAAAATCTGAAATGTAATTGTAACACTTTACAGTAAGGTTCTGTAACATGAACTGCGAATGAACAATTCTTTCACATTTATTAATCGTACTTAAATTTCTACTTGTTAATATTACTGACTGACTATATTCTCCTTCCTAACACTGGAACTACCAAATATCTATAACTACTAAAAGTACCATAGTTGTCATTCTGACCGTTCCTATATAAGACGTCATATTGTCACATCAAGTTTCTATTGAGATATTAAAATTAAGCTTGGAATGGCTGTCTTCCTATTTAATTTAGTCATCGCCAAAAAAAAAAATTTTTTTTGATAAAACAGCCTATAAATGTATAGTTAGGCAA

Associated Phenotype:

Not determined

ZMP

Alleles

Mutation Details

Mutation Details

Mutation Details

Mutation Details

Mutation Details

Mutation Details