Busch Lab

ZMP

ptprdb

Ensembl ID:
ENSDARG00000019945
ZFIN ID:
ZDB-GENE-070615-38
Description:
protein tyrosine phosphatase, receptor type, D isoform 2 [Source:RefSeq peptide;Acc:NP_001092239]
Human Orthologues:
PTPRD, PTPRS
Human Descriptions:
protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668]
protein tyrosine phosphatase, receptor type, S [Source:HGNC Symbol;Acc:9681]
Mouse Orthologues:
Ptprd, Ptprs
Mouse Descriptions:
protein tyrosine phosphatase, receptor type, D Gene [Source:MGI Symbol;Acc:MGI:97812]
protein tyrosine phosphatase, receptor type, S Gene [Source:MGI Symbol;Acc:MGI:97815]

Alleles

There are 17 alleles of this gene:

Allele Name Consequence Status Availability
sa10181 Nonsense Available for shipment Available now
sa450 Essential Splice Site Confirmed mutation in F2 line Not yet available
sa6579 Nonsense Mutation detected in F1 DNA Not yet available
sa39591 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa19469 Nonsense Available for shipment Available now
sa16499 Nonsense Available for shipment Available now
sa32646 Nonsense Mutation detected in F1 DNA Not yet available
sa14902 Essential Splice Site Available for shipment Available now
sa32645 Nonsense Mutation detected in F1 DNA Not yet available
sa19468 Essential Splice Site Available for shipment Available now
sa19467 Nonsense Available for shipment Available now
sa32644 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa10181
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 265 1869 5 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 294 1934 7 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17935242)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18500410
GRCz11 1 19193347
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGGGCRAAATGTYCTGGAGCTCACCAACGYACGCCAGWCTGCCAACTA[C/A]ACGTGTGTCGCCATGTCTACACTCGGAGTTATAGAAACTGTTKCCCAGAT
Long Flanking Sequence:
TTTCTCAAAAAAATGTCTGTCACTTCTCTCATGTTCATCTCTAAATCACTGGCATGTCTATTTGATGAGATGTTTTTTTAATCATATATTCACATTACAAAGAAACAACATAGTTCGGCACATTAAAAAGCAACCCAGCCACATCTTACCTCGCTCTTCTCTACAACACAGATTGCTAACCTGCAGTATACAACATCACAAGTGTTCATCTGTCATACAGAGTGCTCTCTGTAGCATCAATAATGTCTTTAGCATGAGTTAATAAATGGCTCTCTGTCTTTCACACCCTCAGTGCGGCGAATCCCTCCTCGATTCTCTGTGCCACCGATGGATTATGAGATCATGCCGGGAGGAAGTGTGAACATCACCTGTCAGGCGGTGGGGGTTCCTATGCCATATGTCAAATGGATGCTGGGAGCCGAGGATTTGACACCAGAAGACGACATGCCTATTGGGCGAAATGTTCTGGAGCTCACCAACGTACGCCAGTCTGCCAACTA[C/A]ACGTGTGTCGCCATGTCTACACTCGGAGTTATAGAAACTGTTGCCCAGATCACAGTTAAAGGTACACAGGAGGGATGTTAAAAGACTCTTTGAAGATGTTTAAAGGGATAGTTTATTGTTTATTAACCTTTCACTTCTTCTAAACCTTTTTGAATTTCCTTCCTCCGTTGAACACAAAATAAGATTTATTGAAGACAGCTGGAAACGTGTAACTGCTGACTTTCATATTATTTGTTTTTCTATTATGGAAGTCAGTAGGTACAGGTTTTCAGTCTTCTTCAAAATATCTTCTTTTGTGTTCAACAGAAGAAAGGAACTCATGAAGGTTTAAAACTAGGGTTGGGCGATCTTGACCAATTTGACATTGTACAATATCTAATGTGAATCATCACGATGGACGATGGCATCGTCGTTGTAGGCAGCGGTAAATTAATTATTTTTAAATAATTAATGAATCCATAACAAATTAATTATTTGTAGCCTATTGTTTCAACCACCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa450
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 None None 1869 None 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Essential Splice Site 770 1934 13 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17921516)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18486684
GRCz11 1 19179621
KASP Assay ID:
554-0377.1 (used for ordering genotyping assays)
KASP Sequence:
TATTGCATCCTGGCATTCACTTTAATTTTTGTCTTGCTTTGTTTTTGTAA[G/A]CAGCCGCAGAATGACTCAATAGAACATGTGAGTATATCTTTTTTGAACAT
Long Flanking Sequence:
AAAGTTGATTTTTATCATAGGTGCCCTTTAATAAAGCCATTTTTCTGTAAAATCTATATTAAAAATGTTGATGATGAGAATGTGAAAACAGTTTTAAACATAGTTGAAGTTTTGTCATTTTTCAGTGATTCTGGTAACGCCGCTAATTGAAAAAACACTTGAAAAGACTAGAAACATGAGGCAGATTCCAAATATCACTCGATCTGTATGAGTTGTTTGTTTGTCAGTGATTAGGCTTCTTAGCTCAGCTAATGCTCTCTAAATGGACTATAAATTTGCTTTAATTAGCAGATAACATCAGTATATGCTTCTTATCCGCATGCTAAGACAGAACCTCTGATAACTATCTCAGAAACTAAGAGCCTTAAAACCACCATGTAATTGTTTCAGTGAACCTTTCACACTGTTTATTCTCAATAGACATTCATTCTCTGTGTGTGCAAATAGTCATATTGCATCCTGGCATTCACTTTAATTTTTGTCTTGCTTTGTTTTTGTAA[G/A]CAGCCGCAGAATGACTCAATAGAACATGTGAGTATATCTTTTTTGAACATGACCCAAATTTTTCATGCATATTGGATGTTTGCTTTTAAAATATATCAAGATCATATAGTTGAATGGGGGAAAATATATTTCAACAAATGTCTAAGCAAATTAATAGAATAATGAAATCATAAACATTGCTTATTTAGCTTAAATCACATACTATACATGAACATACTATAGTCAACTAAAAAGTGTTTCTATAATAAGGATATTGAGTTTATTAACTGAAAAGCAGGACTTCCAGGAGCCACCATATTAAGCATGGTGATTCCTCCCATTAATTTTGCAACAAGCCCCCTTCCCTATGCAATCTCTGATATGAATACAAATTATATGGAGCAGTATTGTAGGACATTTGGTCTTCTTAGTTATATAGTAAAGTGTGTATGTGTTTATTAGGAAGTGATTTTGACCGATTTGTGGCCGAACACTGAATACTCTGTGACCGTGGCTGCATT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa6579
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 899 1869 13 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 961 1934 15 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17911843)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18477011
GRCz11 1 19169948
KASP Assay ID:
554-4812.1 (used for ordering genotyping assays)
KASP Sequence:
AMMTAACAGCCGAAAGCATCAACTCCTCATCTGCGATCCTGAGATGGGAG[C/T]GACCAAAAAACTATGACGGGATTCAAGRTTACCGCGTGTGGTTCGCTGTC
Long Flanking Sequence:
TTTAATTTAACCCAGCAAACATTATGTCTTTCATATTTAATGTTAAACTTTAAACTTTTCTCTGCTCCGCAGTGCCAGGTATGCCTCTGCTCACAGTGGTGTCATCAGAAGATAGCACTGCCCTGCTAAAGTGGCAGCCTCCCCCTACCGGACTGTCCCCTGTGCTGGGATACAGGCTCTCATACGGCCAGGCCGACCCGTCCTCAGACACCTTTATGGTACAGGAGCTGGACGCAGAGGAACGCTCCTACACAGTCTCATCTTTAAGCGCAGGAGTGCTGTACGTCTTCCGCCTTGCGGCCCGCACTGTATGGGGTTACGGTTCAAGTGCTCAAGTCACACTTCTAATCCCAAACGTGGTGCAAACAACCACCGATGGCATGATAACAGACCCCATGACAACTGAGGGTCAAACCATGAGCGTACAGGAAAACGTTCCAATTTTGGCAAACCTAACAGCCGAAAGCATCAACTCCTCATCTGCGATCCTGAGATGGGAG[C/T]GACCAAAAAACTATGACGGGATTCAAGGTTACCGCGTGTGGTTCGCTGTCACCTATAGTAATGGCACAGACATTGCCATGGAATCTGATGTTTCGGAAACCACAGTGGTTCTTCATGGCCTAAGGGCAAATACTGAGTACGTGGCGAGAGTTTGCATGCTTAGCAAACAAGGCCCCGGGCCCTATAGTCTCCCCATTTCCATCAAAACACAACCCGCAGAGGAAGGTAGGACACATGTGAATCCTCACACAAACAAAACAATTACTGTCAGGCAACCATTCATATACAAAACTTTTCTTTGGAAGGCCATTTTCTCTTTATGTCTGGTCATTTCTGTGTGTTTTTGTTGGTCTGAGTCTCTTGTTTGATGGCGTCCATTAAGCACAAGGTGAGAATCTTTCTGTAAATGGGTTTAAGTCAATGTTGGAGTGCTCCATTATCTCATAAAACAACTACAGTAAAGGTGAGCTCTTGGAAAAGAGTGACAAATTCTTGTCAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39591
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Essential Splice Site 973 1869 13 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Essential Splice Site 1035 1934 15 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17911617)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18476785
GRCz11 1 19169722
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGGGCCCTATAGTCTCCCCATTTCCATCAAAACACAACCCGCAGAGGAAG[G/A]TAGGACACATGTGAATCCTCACACAAACAAAACAATTACTGTCAGGCAAC
Long Flanking Sequence:
GCTGGACGCAGAGGAACGCTCCTACACAGTCTCATCTTTAAGCGCAGGAGTGCTGTACGTCTTCCGCCTTGCGGCCCGCACTGTATGGGGTTACGGTTCAAGTGCTCAAGTCACACTTCTAATCCCAAACGTGGTGCAAACAACCACCGATGGCATGATAACAGACCCCATGACAACTGAGGGTCAAACCATGAGCGTACAGGAAAACGTTCCAATTTTGGCAAACCTAACAGCCGAAAGCATCAACTCCTCATCTGCGATCCTGAGATGGGAGCGACCAAAAAACTATGACGGGATTCAAGGTTACCGCGTGTGGTTCGCTGTCACCTATAGTAATGGCACAGACATTGCCATGGAATCTGATGTTTCGGAAACCACAGTGGTTCTTCATGGCCTAAGGGCAAATACTGAGTACGTGGCGAGAGTTTGCATGCTTAGCAAACAAGGCCCCGGGCCCTATAGTCTCCCCATTTCCATCAAAACACAACCCGCAGAGGAAG[G/A]TAGGACACATGTGAATCCTCACACAAACAAAACAATTACTGTCAGGCAACCATTCATATACAAAACTTTTCTTTGGAAGGCCATTTTCTCTTTATGTCTGGTCATTTCTGTGTGTTTTTGTTGGTCTGAGTCTCTTGTTTGATGGCGTCCATTAAGCACAAGGTGAGAATCTTTCTGTAAATGGGTTTAAGTCAATGTTGGAGTGCTCCATTATCTCATAAAACAACTACAGTAAAGGTGAGCTCTTGGAAAAGAGTGACAAATTCTTGTCAGTACCATGAAAAAAAGAGGGACTATGTATTTTTCCTGCTGTCAGATAAAGTAACATCCTGATGTAGGAAATGATTTTAAAAGAAACCGTTGAAGAGATTTGTTGACGTTCTTCATAAATGCTTCAGCTTTGATGGAGGCCAGAGGTTGTGCTCAGGTGAGCTGAAGTATTGATGTGTAATTTGTTGATCTTTGTTTTTCCCCTTTTCATAGTTTTTGCTGTGAACTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19469
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 990 1869 14 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 1055 1934 16 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17911075)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18476243
GRCz11 1 19169180
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGAACTTCAAAGTGAAAGCTGCAATGAAGAGTTCAGTTCTGCTGACCTG[G/A]GAGTCTCGAACCACCAGTAATAAAGCGCAGTCTCTCATCGTAAGAACTAC
Long Flanking Sequence:
TCAGGCAACCATTCATATACAAAACTTTTCTTTGGAAGGCCATTTTCTCTTTATGTCTGGTCATTTCTGTGTGTTTTTGTTGGTCTGAGTCTCTTGTTTGATGGCGTCCATTAAGCACAAGGTGAGAATCTTTCTGTAAATGGGTTTAAGTCAATGTTGGAGTGCTCCATTATCTCATAAAACAACTACAGTAAAGGTGAGCTCTTGGAAAAGAGTGACAAATTCTTGTCAGTACCATGAAAAAAAGAGGGACTATGTATTTTTCCTGCTGTCAGATAAAGTAACATCCTGATGTAGGAAATGATTTTAAAAGAAACCGTTGAAGAGATTTGTTGACGTTCTTCATAAATGCTTCAGCTTTGATGGAGGCCAGAGGTTGTGCTCAGGTGAGCTGAAGTATTGATGTGTAATTTGTTGATCTTTGTTTTTCCCCTTTTCATAGTTTTTGCTGTGAACTTCAAAGTGAAAGCTGCAATGAAGAGTTCAGTTCTGCTGACCTG[G/A]GAGTCTCGAACCACCAGTAATAAAGCGCAGTCTCTCATCGTAAGAACTACACTTATAATATGTGTTTGTTGTGTGTATGTGTGTGCTTGTGTTGGTTCATTAATTTCCTTTGGCTTAGTCTCTTTATTCATCAGGGGTCGCCACAGCAGAATGAATCGCCAACTTATTCACCATATGTTTTACACAGCGGATGCCCTTCCAGCTGCAACCCATACTGGGAAACATCCATATACACATTTACACACATACGCTAAGGCCATTTTAGTTCATCCAATTCACCCCTACCGCATGTTTTTTGATTGTGGGGGAAACCGGAGCACCCGGAGGAAACCCACCCATAGTGAGAACATGCAAACATCAGACAGAAACGCAACTGGCCCAGCCGGGACACGAACCAGTGATCTTCTTACTGTGAGGCGACCGTGCTAACCACTAAGCCACTGTGTTGCCTAAAGCATTTAAAATAAAGCTATATTTAAATCTCACACCTGATATAGAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16499
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 1036 1869 15 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 1101 1934 17 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17905976)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18471144
GRCz11 1 19164081
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGAAGTTAGTGACTAAGCTAAAGCCTCARTCTCTGTACAACTTTCTRT[T/A]AACCAGTAAATCCGACAGCACTGGAGGCCTGCAGCACCGCACGGACGCCA
Long Flanking Sequence:
GTAGTGAGTTTGTATTTTAATCTTTACCTGTTTAAACTTTTTTTTAAAAATCGAATTGTTTGAAATCATTCAAAGTCATCTTTTAAGTGTTCAGAGGCCCTCTAGTGGTATCTAGACCCCTTGTTGAGAACCACTGGGTTAGGTGATGAATTGTTTCATAAGCTTAGTATTAAATCAAGCTTGTGACTGTGTGTGTCTGTGTCACCACCTCTTCATGCAGCATATTGAGACTGAATTGTGTATGACAGTGTTTGTTTAAGTGTGAGTGTGTGCATGTTAGCAAGTGTCTGAGGTGTCAGTCTAAATCTTTCTCTGCTCTCTTTATGTGTGTGTGCCATAAGATACTCATAGTTTGACTGTCAAAGTGTGCATTTAATGTTTTCCATCTTTCTTTCTTTGTCAGATCTCATATGGCGATGGCGAGAGTGTGGAGGTCGATGGGCGGCTCGGGCAGAAGTTAGTGACTAAGCTAAAGCCTCAGTCTCTGTACAACTTTCTGT[T/A]AACCAGTAAATCCGACAGCACTGGAGGCCTGCAGCACCGCACGGACGCCATGACGGCTCCAAACCTGATGACCAGGAAACCACAGCTGCTGGACAAGACCAGCTCGCAGAGCATTGCCATTCTGCAGCTGCCCACTGTACAAGGCCAGGCTAACGTCAGGTCAGGGAAACTCCAAAACATATACAGGGAGAATTAACATTAGGTTCTAAATTACTTCTCAAACTTATAAATCTGGAAAAGAATTAGGATCTGAGGATTCTGAAATATAAGCAGAGAACTAAAAAATAATTAACTCAGAATTCTATTGAAAACTCTGAGTTTTGAAGTTGTTAAAGTTTTACAAAGTTATGACAGTTACTTGAATGAATTTTATTCTGAATTAGTCAACATTTCTATTCAATAAATTACTGATAAATTAATCTTTAAGAGTAAATATTATATTACTGTATTTTCAGGAAATAATTTGTACCTGACTGTAAGTTTCACTTTGTAAAAATCGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32646
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 1175 1869 17 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 1240 1934 19 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17903800)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18468968
GRCz11 1 19161905
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATGGACATGTGTATGGAGCCTTCATGAACCGACCTCTGGTGAACGGA[C/T]AGGAGTATGTGTGCTTCGTACTGGCTATTCTCGAACTGGGCCAGAATGTA
Long Flanking Sequence:
GAGATGAACCTCGATGAGGTACAAATATTTGTACATTATTTAGTACTTTGTTCAGTTTTAACGAAGTCCTTTTAAGACAAGTCATTTCACTAGGCGGCCATCATTGAAACATCTCTCAGGCAGTATGCTTGGGCATTCTGTTTGAATGGGGAAACATCAAATTCTGCAAAACTGCTTGTCAAGCTTTTCCCCATTCAAAATGATATGAGTGACACGTCTTGTGTATTCTAACGTCTTTTGGTTTTCTGCCATTGTCAGCATATTAGTTCACAGTTGAAAGCACTTGTTGATTCAGTGTTGGCTGTGGTTAATATGTCCTGTTTTCTGTTTTTCTCCAGCTGCTGAGGGAGATTAATGGCACCGGTCGCTCTGTGCGTTTACGGAGGCAGGCAGAGGCAAAGCCTTACATCACTGCTCATTTCCAAAATCTTCCTGCTGAATTTAAGTTAGGAGATGGACATGTGTATGGAGCCTTCATGAACCGACCTCTGGTGAACGGA[C/T]AGGAGTATGTGTGCTTCGTACTGGCTATTCTCGAACTGGGCCAGAATGTAAGTCCACTATATAATTTTGGGGTCTGCAGTGATAATGTACTGTATAGGAACAGAATAACTGTAAAGATTCACAAAATGTTGGTTGTTAAAGCTGGAAATGTGGCATTGAAAGTATAAAATGGATTTGACAATGTTAAGAAATAAGGTCCTGGGGTTTCAGATATGTTTATATCCATATTTAGTAATACACCATACCATTATTTGGTGAAATAACATGATTTTTAATCATAACACTTCAAACATTTTTTGACAAAAATACTTTAAATGACAATATCAGAAATTTTGAAGAAATGTTATCAGACATACGTAGAATCAAACAAATTAAATAAATAGAAATAATTAAATAAAACAAAAATAAACCTTTTTGCACAAATAAATCTAGTTAATCCAGAGAAATGGTTTTATTTCAGTTAGAGCAAATGTTGATGCAATTTGATTTATAAATCCTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14902
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Essential Splice Site 1244 1869 18 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Essential Splice Site 1309 1934 20 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17901104)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18466272
GRCz11 1 19159209
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCYGTCATCTTCATCATCAGCRTCGTCATCCTCATYCTCCTCTTTAAAAG[G/A]TGAGACAGACAAGAYAAATCAGCAGAAAGTGAGATTTAAWGAGTTRAACC
Long Flanking Sequence:
AAGACATCTCAAACAATGTCTTCTTTGCATTTAAATTAACAAAACTGAGCGAATGACACTTAATGACAGCTGTAATAAGCATGCATACATCTAATTCATATTCATAAAGTTTTATGTAATAATTAAAAAATTGTCATGAAAGTATTATGAGCAGCCCCTTCAAGTGTCAACCAAATGGATTTATTAAAAATAAAAAACACATGCAAATAAGCCATAAAGCATCTTATATTGTAGATATTGTGCTGTAAAAATAATTTACAGCACAAAAAAATAATTATTTTTTTAACATATTTGAAAATACTGTATATTTATGCTAATGTGCTGATCTTTGATTGACAGACTGTCTACTCCACAAGCCCATTCTCTGATGCGGTGCTCTTCTCTGATGTGGAGCCACAGCCAATCGTAGATGAGGAGGAGGGACTTCTGTGGGTGGTTGGACCAGTGTTGGCCGTCATCTTCATCATCAGCATCGTCATCCTCATCCTCCTCTTTAAAAG[G/A]TGAGACAGACAAGACAAATCAGCAGAAAGTGAGATTTAAAGAGTTAAACCACAGTTAAAGAGGATTTTAGATTAAATGACAAATGCACGATGCAGATATGTTCAGTGTTTCATTGCTGTAAGGCCTAAATTTCCTAATCCTTTAAAGTCTTTTAAAAGCGAGTTTTAAAATTTCAGATGGAAAATATATATATAAATATATATATAAATGAATATACTTTTTATTAAATGTGCTACACTCTAAAATGAATTTGATTTAATCTGCTACTATAGAGCAGTGACGTGTGGTGAGGTTTTTGGCTGGTGAGGCATTGACTCTTTCTAAGTCAAGAGTCAGATTTACAAACATATTCACTCGATATATTTTCCAGCTGCCGAATGTGTTTCATTTATAATACCAGCATTCTTTCTATACTCATGGCAGGTACATATCGGGCCAAGAATGCAAATTGTATAGCGATTAAATATCCCTCCCAAAAACACCCAGCTGTATGCTACAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32645
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 1318 1869 21 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 1383 1934 23 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17894659)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18459827
GRCz11 1 19152764
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACATAGAGAGGATGAAGGCCAATGACAGCCTGAGGTTCTCTCAAGAGTA[T/G]GAGGTCAGATCTCTAAACACACACACACACATTCACACACACCAGCACAC
Long Flanking Sequence:
TGAATAATAGTATCTTGAAAAAATATCTAGTAAAATATGATGTACTTTCTACTTGGCACAGATAAAAGAAATCAGTTATTAGAAATTAGTTATCAAACTGTTATGTTTATAAATGTTGTTGGAAAAAAAAAATCTCTTTGTTACACAAAATTAGGGACAAAAAATATAGACAAATTGAAATTTAACAGGAAAGCTAATAATTCTGACTTCAACTGTATTCTAACAGTTAATTTAACTTTGGTGACATTATTTTCACAATTGTCCTCCTTAAAACATACACTCATAAATCCTACTGCTAAACCATGGATGAGATCATTAACACTCCCTCACCGTGCTCAGATTAGTCAATCTAGTATCAGCCTCACAGTGTGACGTGATCAGTGTGTTTTTGTGCTGTGATTGACAGGCATGACCAGCCACCCGCCAGTGTCCGTCTCTGAACTGCCCGCTCACATAGAGAGGATGAAGGCCAATGACAGCCTGAGGTTCTCTCAAGAGTA[T/G]GAGGTCAGATCTCTAAACACACACACACACATTCACACACACCAGCACACATAATTTCACACCTCCGGATGTAGATTGAAGGCATCTGTTACACCCTAATAGATTTCTTACACTGTAAAAAAAAATGCTGGGTTTCAAACACTTGATTTGTGTAGAGAGAATGTGAAGGAATTAAGTTGACTTGTTAGTTTTTACAAATTTAAGTAGAAATTAAAATTCCCAACTAAAACCTCAAGAATTGTGTTTTTAGTTCAGTTTAAATAATGTAAGTAGTTTGAACAAACAGCAAACATAATTTTTTTTAGTGTAGACAAAGAACTTAGAATCAACAAGAGGCGACACTCAATAGAACGTTCCATTGCAACAGCAGCACCAAGCAACAGCCCCACGATTTCGCCATTTTGGCTTCCGCAGCTGCTTTGTATTTTATTTGTTTGTTTATTTATTTATTTAAAAAGGACATTAAAGCTGAAAAACAATCTGAAAGGTGCCAATACAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19468
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Essential Splice Site 1607 1869 27 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Essential Splice Site 1672 1934 29 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17872644)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18437812
GRCz11 1 19130749
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATATCTGTTCATTAAATGATACAGATGTTTGTGTGTGTGTCTCCTTTTC[A/T]GCGGTTAGCTAATGCCAAAGCGCATAACTCCAGATTCGTCAGTGCCAGCC
Long Flanking Sequence:
GTTTTAATACTTAAAATATTGATTATTATATTATTTGCTGTTGCTGGCGGCTCAATTTTGGTTTGTACACTGTAAAGAAAATTAGCTTTTTTTTTTTTAGTACAAATATTTAAAAATTCTTAAGTCATAAAGCATTTCTACATGCAAAAAATATTGTCTCATAATATGCAAAAATTAAGTAATAATCTAAATAAGACTAAATAATCTGCCAATGGGCTAAGCAAAATGATTTTATGCCAAAACAAAAACATGATTAATTTGCTTACCTCATTGACAGATTATTGTTCTTGTTTTATGGAAAAACTCACTTAATTTTGACATATTATTTCTTAAAACAAGACTATATTTTTGGCTCATCTAGAAAATGTTTCTTGATTTAAGAATATTTAGATGTTTGGACTAGAAACAAGACAAAAAATCCAAGCAAGAAAAGCATTTTTTGCAGTGTAATATATCTGTTCATTAAATGATACAGATGTTTGTGTGTGTGTCTCCTTTTC[A/T]GCGGTTAGCTAATGCCAAAGCGCATAACTCCAGATTCGTCAGTGCCAGCCTTCCATGCAATAAGTTCAAGAACCGGTTGGTGAACATCATGCCATATGAGAGCACACGTGTGTGTCTGCAGCCAATCAGAGGAGTGGAGGGATCTGACTACGTCAATGGCAGTTTTATAGACGGCTACAGGTACAACGTCATCTCGCTTCTCATTTCTTTATATAAATAAAACAAATGTTCTCAATTCTTTGTTTCTTCCTCATCTCTCTTCAGGCAACAGAGGGCGTATATTGCGACTCAGGGGCCACTGGCAGAGACAGTTGAAGATTTCTGGAGAATGCTTTGGGAACACAATTCTACTATAGTAGTTATGCTTACTAAACTCAGAGAAATGGGAAGGGTTAGTAGACACATGCGCACAAACACACACACACAACAATGACGTTCAGATGCTGTCATATATGACAGTAGCAGTGCGATATGGCAGTATATCGGCACTGGTGAGAGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19467
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 1753 1869 30 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 1818 1934 32 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17869989)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18435157
GRCz11 1 19128094
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTGAAATGCTGATGTATCTTATTGGTTTTTCTCTCTCTTTAAGGATGGA[C/T]AATCCAGAACAGTCCGGCAGTTTCAGTTCACGGATTGGCCAGAGCAGGGT
Long Flanking Sequence:
AATTTTTCTTATGAAAAATATGAGCATGGAGTGAATACACATTTTCTGATTGTTAAATTCATGTATTTGATGGGTTTTGTAATCCATGTTAACACACTGTCTAATCTGTAGGTGCATTCTTGATTCTGAAATTCCTTCATACAATTCAGTATATAGATGCATGGAGAAAATCTGATTCTTTAAGTCATTTTTGTAACGATTCAGTCAAAATAATTGGTTTGCATGATTCATTAGCTTAGGAATTTCCACTTTTTAAGCATAAAAGTGAGTCTAAGCATTAAAAAATTCTAGGTTTTCTCAAATACATGATATAAATTTTTAATTTTCAACATGAATCAACATTACAAAATTATCCAACCCTTAAAACTCATTAGCTGGCAGGTTAGAAATTATTTAATAGTTATGAAAATTGTAATACAGTTTTATATAACTTTTCCACACAGACCCCTGGTTGAAATGCTGATGTATCTTATTGGTTTTTCTCTCTCTTTAAGGATGGA[C/T]AATCCAGAACAGTCCGGCAGTTTCAGTTCACGGATTGGCCAGAGCAGGGTGTGCCAAAATCTGGCGAAGGGTTCATTGACTTCATTGGTCAAGTGCACAAAACAAAAGAACAGTTCGGTCAGGATGGGCCAATCACAGTACACTGCAGGTGAGGAAAATCTGAAATGTAATTGTAACACTTTACAGTAAGGTTCTGTAACATGAACTGCGAATGAACAATTCTTTCACATTTATTAATCGTACTTAAATTTCTACTTGTTAATATTACTGACTGACTATATTCTCCTTCCTAACACTGGAACTACCAAATATCTATAACTACTAAAAGTACCATAGTTGTCATTCTGACCGTTCCTATATAAGACGTCATATTGTCACATCAAGTTTCTATTGAGATATTAAAATTAAGCTTGGAATGGCTGTCTTCCTATTTAATTTAGTCATCGCCAAAAAAAAAAATTTTTTTTGATAAAACAGCCTATAAATGTATAGTTAGGCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32644
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089132 Nonsense 1790 1869 30 32
ENSDART00000127145 None None 205 None 5
ENSDART00000131579 Nonsense 1855 1934 32 34
ENSDART00000143663 None None 205 None 5
Genomic Location (Zv9):
Chromosome 1 (position 17869878)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 18435046
GRCz11 1 19127983
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGCGAAGGGTTCATTGACTTCATTGGTCAAGTGCACAAAACAAAAGAA[C/T]AGTTCGGTCAGGATGGGCCAATCACAGTACACTGCAGGTGAGGAAAATCT
Long Flanking Sequence:
GTGCATTCTTGATTCTGAAATTCCTTCATACAATTCAGTATATAGATGCATGGAGAAAATCTGATTCTTTAAGTCATTTTTGTAACGATTCAGTCAAAATAATTGGTTTGCATGATTCATTAGCTTAGGAATTTCCACTTTTTAAGCATAAAAGTGAGTCTAAGCATTAAAAAATTCTAGGTTTTCTCAAATACATGATATAAATTTTTAATTTTCAACATGAATCAACATTACAAAATTATCCAACCCTTAAAACTCATTAGCTGGCAGGTTAGAAATTATTTAATAGTTATGAAAATTGTAATACAGTTTTATATAACTTTTCCACACAGACCCCTGGTTGAAATGCTGATGTATCTTATTGGTTTTTCTCTCTCTTTAAGGATGGACAATCCAGAACAGTCCGGCAGTTTCAGTTCACGGATTGGCCAGAGCAGGGTGTGCCAAAATCTGGCGAAGGGTTCATTGACTTCATTGGTCAAGTGCACAAAACAAAAGAA[C/T]AGTTCGGTCAGGATGGGCCAATCACAGTACACTGCAGGTGAGGAAAATCTGAAATGTAATTGTAACACTTTACAGTAAGGTTCTGTAACATGAACTGCGAATGAACAATTCTTTCACATTTATTAATCGTACTTAAATTTCTACTTGTTAATATTACTGACTGACTATATTCTCCTTCCTAACACTGGAACTACCAAATATCTATAACTACTAAAAGTACCATAGTTGTCATTCTGACCGTTCCTATATAAGACGTCATATTGTCACATCAAGTTTCTATTGAGATATTAAAATTAAGCTTGGAATGGCTGTCTTCCTATTTAATTTAGTCATCGCCAAAAAAAAAAATTTTTTTTGATAAAACAGCCTATAAATGTATAGTTAGGCAAGTAACATTAGACCACCCGTCAATCTCCACGCCTCACTTTCATTTTCACTTTCACAAGCACGGGAGAAGGCTTTTTCACAACACTTAATATGCTGTGTTGTGACTACCCTTA
Associated Phenotype:
Not determined