Busch Lab

ZMP

rnf17

Ensembl ID:
ENSDARG00000056387
ZFIN ID:
ZDB-GENE-030131-6451
Description:
Rnf17 protein [Source:UniProtKB/TrEMBL;Acc:Q58EH8]
Human Orthologue:
RNF17
Human Description:
ring finger protein 17 [Source:HGNC Symbol;Acc:10060]
Mouse Orthologue:
Rnf17
Mouse Description:
ring finger protein 17 Gene [Source:MGI Symbol;Acc:MGI:1353419]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa41439 Nonsense Mutation detected in F1 DNA Not yet available
sa10164 Nonsense Available for shipment Available now
sa7188 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa41439
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060225 None None 422 None 12
ENSDART00000123679 None None 500 None 13
ENSDART00000132295 None None 1155 None 27
ENSDART00000145659 Nonsense 81 323 3 10
Genomic Location (Zv9):
Chromosome 9 (position 30584299)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29740245
GRCz11 9 29550991
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAGGAGTTGATGGTTTAGAGGTGGACAGCAGAATCATTGGCCTCATCTA[T/A]ACAGCACGCATGAACACAAAGAAAGGGTAATTACTGTCAAAACTCTAAAC
Long Flanking Sequence:
CTTGTCGCACTCGCTTGCATTTCTGGTCTGTCGCATTCGCATGCCTATGAATGGAAGTATATGGAGCGAAAAGTGCAGTGTGATCGCAGCTTTATAATACAAGTAGTTTCACCTACTATTACTAGGTAACAAACTAAGATTATCTAAGATTAGTTTGACAATTATCTGTATGCTGGAATGGAGGGTAGTGGTTTTTACTTCCTTTCTTGGCCAAAACATGCCATAAATTTAACATAAATTGAAACTATTGTGTGTTTAATGATATGCTGTTATAAATTTAAACTTTTCTTATGATGTACCACGTATATGTAGACATTACATGAAACATTAGGTCATGAAAATTGAGTCCTGGAAAAGTCACAGAATTTTTGTAGTAAACATGTGTCTGAACCCTGAGTTATGGAGCCTTTTCTGTTTGTTTTAATGTAGATGGACACCAGAACTAGCGAGGAAGGAGTTGATGGTTTAGAGGTGGACAGCAGAATCATTGGCCTCATCTA[T/A]ACAGCACGCATGAACACAAAGAAAGGGTAATTACTGTCAAAACTCTAAACTGCTGTGGAGTTTTGGTGATCCACTCTTTAAGTTCACTTTTAGTATGCTTTTTTAAAATTCGTTTGACTCTTGAAAAATAGCAACTGCAAAATGAAGGTTTTCATCATCAGGCACTCAGGAGACAAGTGGAAGTCCCAAAAGTTTAAGAGCCCACCCTCATCTGCAGCTGTCCACACTGAGGAGAATGCAGAAGGGGTACGAACACATTACACTTGCAGATCTCATTTCAGAGCAATGTTACAGTAATGTTTGTGTATGCTTGTTCTTGTGTAGAAGCCAGATGTAGTGAAAGTTTTGGATGAAGCTCTTACGAAGGCAACAGAAAATCTTAACCAACTTGATAAACTTCACCAGGTAAAATTAAATATCTTTCCAGAGCAGAAGTCATTTATTTGACTTATTTGATGTGTGCCTATCGTTATTTTAAACACTGCAATTTTATATTAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10164
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060225 None None 422 None 12
ENSDART00000123679 None None 500 None 13
ENSDART00000132295 Nonsense 341 1155 8 27
ENSDART00000145659 None None 323 None 10
Genomic Location (Zv9):
Chromosome 9 (position 30593073)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29749019
GRCz11 9 29559765
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAGTTAGTGATTAAAAAAATGTCTTTATATCTCAGGGTTCCCTGGTGGC[C/T]GAATGGTGGAGGTTCGGTTTGTGGACTTYGGCTACAAAAGRACTCTCTCT
Long Flanking Sequence:
AATGTGTGTGCAGATTCTACTGTCCGGTGATAACCACTGGCAGTGCACCTCTGCTCTTCTACCCTTCAGTTCAGCCCTCACTCAATGTAGAGGTCAATGCTATGGTTTCTCATGTTAACACACCATCAGATTTCTATGTACAACTAGTAAGTATTAATAAAACACATTATTATTATTATTAGAATTATGAATATATATTATATAAACAACAGAAAGAGATTTACACACTCTTGATGAATGCAGGTTGAAAATACAGAGTACCCGCTGTTGCACTCGAAGCTTCAGGACTGTTACAACCAGCCCAAGTCAAACAACGAGTGCCAGGTCTACTGCCCTTCTCTCTCACAGGCCTGCGTCGCTTTCCATGACCAAGAATGGTCCAGGGTTCAGGTCACAGGTGTGTTGATGTGTGTATACAGATTATCGAATATTTCCAACAAAAAATAAAAGACAGTTAGTGATTAAAAAAATGTCTTTATATCTCAGGGTTCCCTGGTGGC[C/T]GAATGGTGGAGGTTCGGTTTGTGGACTTTGGCTACAAAAGAACTCTCTCTGTGAAAGATCTGAGACATATAAAGGATGAGTTCTTTGTTCTGCCAGAAATGGTATGTTTGAAGTGTGTTGTACAGCGATTCTTAGTTTTATCAATCACATTTACACACTGCCTCCAAACTTTTGTCTGCCATAAAAAATGGATCAGAAGAGTTTTCTATTAAAGCATATCAAACACAAATGAAATTTGATGACACTTCTAATAAATAACATGAGAAAGTCTTTTTTTATTTGTTTCTAGGCTTTGTGGTGCAACCTGAACGATGTGATCAGTTCTCAGGAAACATGGGCTAATGAAGCCTGTGAAAGCTTTAAAGAACTCGTGGAGGGCAAACTTATGACTGTTGTGGCTAAAAGTAAATTTACAGCAACATGCATTAATGCACAGACATCTGAAACAAATCAGTGCTTTTAATCAAATCTGCTAGTTACTAGGGCTGCACGATATTGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7188
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060225 Nonsense 265 422 8 12
ENSDART00000123679 Nonsense 343 500 10 13
ENSDART00000132295 Nonsense 998 1155 23 27
ENSDART00000145659 None None 323 None 10
Genomic Location (Zv9):
Chromosome 9 (position 30601785)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 29757731
GRCz11 9 29568477
KASP Assay ID:
554-5146.1 (used for ordering genotyping assays)
KASP Sequence:
ACAAGAGTCTGTGCAAACTGGAGCAGGATGAGAGTATGGAGGAAACTCTT[G/T]AACAAGTGAATGAGAATATTGAAAATCTGAGCCTGCTGACAGACTTCCCC
Long Flanking Sequence:
TTCATATTCCTAAAGAAAGAAAACATTTTCCTGCCAAGGTCAAGCATATCCGCACGCCAAATGAGGTATGTGGTTAGTTTCACCATCAAATGTTTTAGTCTGGTTTAATAATGTAAAAAAATCCTCCATGAAGAATTTGAAATCTCAATGGAATATATAGATAGTTTCTTTTGTTCAGTCTAAAAAAGGCAAAGCCCCTATAACACATCTGTCTATTACATAATCAACAGAGACCAATGGTGGTTTTCAGCCATTACCAAACAGAGCAAACTTTTTCCAGAAAGTTCTTTTTGGAAAATGAAACAAATTCAAATGACATAATATATTGATTTGAAATAATGCCATAGTCTGTTCTTCTCTTTTACTTGAAGTATATTGTGGCCTCTATAGTCGGTTACTACTGTATATGTTACTAATATGTGTGTTTGCAGGTGTTCCTGTGTGTCCTGGACAAGAGTCTGTGCAAACTGGAGCAGGATGAGAGTATGGAGGAAACTCTT[G/T]AACAAGTGAATGAGAATATTGAAAATCTGAGCCTGCTGACAGACTTCCCCATTGGTGCTTACATTTACCATTTGGTTATGGTTCATTTCATTGTGTGAGAACTTTGTGTGCATGCATACCTATTATACAAGTTTACTTAAACTGTGTATTATACTCTTTCTTTAGTTCAAAACACTGGGATTGGCTCTAATATGCCTGTGATTTAATAGAAATTAATTGGTTGGGACAAAGGATTTAATGTGTGTTTGTTTGCAGAGTGTCTCTGTCTGGCCGAGTACAGTGATGGTAAATATTATCGTGCGAAAATTCTGGGATTTTCTGAAGTCACTCCCTCTGTCAAGCTACTTGTGAGACATGTTGATTTTGGCTCGGATGACATCATACCATTGCACAAGTAAATCTACATGTTTTACAGCTATTGACTATTGATTTGCTGCATGTTTGTGTAAGAAATGTGAAAAAAGATGAAAACCCTCATTTTTGTGAGAACAGAAAAAAAT
Associated Phenotype:
Not determined