ZMP
ptprsa
Ensembl ID:
ZFIN ID:
Description:
Receptor protein-tyrosine phosphatase sigma [Source:UniProtKB/TrEMBL;Acc:Q90YJ4]
Human Orthologue:
PTPRS
Human Description:
protein tyrosine phosphatase, receptor type, S [Source:HGNC Symbol;Acc:9681]
Mouse Orthologue:
Ptprs
Mouse Description:
protein tyrosine phosphatase, receptor type, S Gene [Source:MGI Symbol;Acc:MGI:97815]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10109 | Essential Splice Site | Available for shipment | Available now |
| sa17813 | Nonsense | Available for shipment | Available now |
| sa13576 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10109
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000083308 | Essential Splice Site | 1394 | 1902 | 21 | 31 |
| ENSDART00000136798 | None | None | 169 | None | 3 |
| ENSDART00000145114 | Essential Splice Site | 1289 | 1797 | 20 | 30 |
Genomic Location (Zv9):
Chromosome 22 (position 3406864)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 3404178 |
| GRCz11 | 22 | 3423446 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACGTCATCGCCTACGACCAYTCCCGCGTAATCCTGGCACCCATCGAAGG[T/A]CAGGGAAAGCTTGCACACACAAACACATACATGCCGATTCTTGAAGAGAA
Long Flanking Sequence:
ACTGTCCACATCTCCGTCCCGCCAAAGCTTACCTGGCCCGAAAGCTTGTGCATATTTAAAGTGATAGCAGACGCTTTTAATTACGCTTTAATGTGCTGCACTTTTATCTTGTCGCGAATGTTTATCTGAGCTGCTTTTGTGAAGGATTCTCATTTCTGTTTTTTCCTTCCGCTAGTTTTAGCTCTCCCAGGCCCCGTGGCCTCACTCAACCTCGCTTTCTGAGCGTTGAACTCTCCTCTGTTTTTCTTCACCTTCATCTGATGTTCTGGCGGATGCGAACTCGCTCTCTTCTCGCATTAGTATTCATGGCAGTGATGCTGAGGGATTGGGAAAAGCCCTGAGGGTTGGTTTCACTGCGTGCTTTTCTCTCCACAGTCCATCGATCCGGGTCAGCAGTTCACCTGGGAGCATTCCAACCTGGAGGTCAACAAACCCAAGAACCGCTACGCCAACGTCATCGCCTACGACCACTCCCGCGTAATCCTGGCACCCATCGAAGG[T/A]CAGGGAAAGCTTGCACACACAAACACATACATGCCGATTCTTGAAGAGAAAAACGTCTCAATTGCATCTGAAGGTTCCGGAATGGCTGAACTTTGTTGTCGCCCACAGATACGTCTGGTTTTTAAAAAAAAAAAAAAAAAGGCTGGTTTTGTAATTCGTTTCAATGCTGAGATCCGGAAATCTCTTTCAGTGTGATGGATAGAGCTAGCATGTGCATTTGGGAGGATCACCATTCATGTCTGTCTTATGCATTTTTACAGTGTGGGAAGCGTCGTCAGGTATTGAAGAGCAGGGTGAGGCGACCGGTATTGAAGATTCGGGTGGGGGATTGGCGAGACCGGTATTGAAGAGTGTGGGGGGTTTGGGCAACTGGTATTAAAGAGCGGGGGGGGGCAGCTGTCAGGTATTGAAGAGCAGGAGGAGGTGACCAGTACTGAAGAGTCAGGTGGGGGAGCAGGGGAGATCAGTATTGAAGAGTGTGGGGGGTTGGGGTGACCTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17813
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000083308 | Nonsense | 1613 | 1902 | 25 | 31 |
| ENSDART00000136798 | None | None | 169 | None | 3 |
| ENSDART00000145114 | Nonsense | 1508 | 1797 | 24 | 30 |
Genomic Location (Zv9):
Chromosome 22 (position 3388979)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 3386293 |
| GRCz11 | 22 | 3405561 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACGATGCCCTCCTGGAGGCTGTAGCCTGCGGGAACACCGAGGTGGCGGCA[C/T]GAAGCCTCTTCTCCTACATCCAGAAGCTGGCACAGGTGGAGGCAGGAGAG
Long Flanking Sequence:
AGAACAGGGGTCACCAATCTCAGCCCTGGAGGGCCATTATCCCTGCAGGATTTAGCTCCAACTTGCTTCAACACACCTGCCTGGATGTTTCAAGTATACTTAGTAAGACCTTGATTAGCTTGTTCAGGTGTGTTTGATTAGGGTTGGAGCTAAAATCTGCAGGACAACGGCCCTCCAGGAACAAGCTTGGTGACCCCAAAAACTTATAGCACCTTTAAAAGTCCTTGGCAAAGACCTAATTGCATTGACCTGTACCTTTCTCTAATCCCTGACTTGTATCATCATTTAATTTCAGTGCTGGTGTGGGCCGCACAGGCTGCTTCATCGTTATCGATGCCATGCTAGAACGCATCAAGCACGAGAAGACAGTGGACATCTATGGTCATGTTACCCTCATGCGCTCCCAGAGGAACTACATGGTGCAGACGGAGGACCAGTACAGCTTTATCCACGATGCCCTCCTGGAGGCTGTAGCCTGCGGGAACACCGAGGTGGCGGCA[C/T]GAAGCCTCTTCTCCTACATCCAGAAGCTGGCACAGGTGGAGGCAGGAGAGCATGTCAGCGGCATGGAGCTGGAGTTCAAGGTAACCAGAAGACAATTAGAGACACTTTAGAGACTTTCATTTCTGATTACCCTGCTGAAAAATCCAGCTTATACCAGCCTAGGCTGTTTGGCTGGTTTTAGCTGGTCGACCAGGCTGGTTTTAGAGGGGTTTTGTTTATTTCCAGGCTGGTTTCCAAGCAATTCCAGCCTGGTCTTAGCTGGTCAGGCTAGAAAAAGACCAGTTAAATCCAACTAAAATCAGCTTGACCAGCCTGGTTTAAGCTGGACATAGCTGGTTTTGGCTGGGCTCCCAGCCTGGCTAGGCTGGTCAAGCTGGTTTTAGCTGGTCATCTCCCAGCCAAACCAGCTAAGACCAGGCTGGAAATGGCTGGAAACCAGGCTGGAAATGGCCAAAACCCCTCTAAAACCAGCCTGGTCGACCAGCCTAGGCTGGTTTAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13576
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000083308 | Nonsense | 1679 | 1902 | 26 | 31 |
| ENSDART00000136798 | None | None | 169 | None | 3 |
| ENSDART00000145114 | Nonsense | 1574 | 1797 | 25 | 30 |
Genomic Location (Zv9):
Chromosome 22 (position 3385472)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 3382786 |
| GRCz11 | 22 | 3402054 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAACCGCCTGGTTAACATCAWGCCGTACGAGACCACTCGAGTGTGCCTG[C/T]AGCCAATCAGAGGGCTGGAGGGCTCCGACTACATCAACTCCAGCTTTATT
Long Flanking Sequence:
GCCAAGGTGTCTGGCTTTGAGAATGTCTAATCACCTGAGGGAACATTGCTGATGATGTGTCCCAGTGCTTCAAGACATTAATGCATACTCCACAAACTAAATCCCTGAAAGTGTGATGAATGGACCAATCAGGTGGGACAGTTCAGGGGGGTTCAAGGGGCCCAGAATTCCTAGCAATGCCAATTGATTGAATTTCGCTCCCTTTTAAGTATTTTCAGAGATTCTACTGGCAGTTACAATGCAACAAAGGGGAAATGTAGTTCTTGTGGGACCAAACCACTCCCCCCCTTCAAACCCCTACCTCCCCATCTCCCCCACCCCCCCCCCCCCCCCACTCCCTTTTAGGAAAGTGACTTAACTCCAAAATCTTTCTCTCCCCACAGCGATTGGCGAACTCCAAAGCTCACACGTCCAGATTCATAAGTGCCAATCTGCCCTGCAACAAATTCAAGAACCGCCTGGTTAACATCATGCCGTACGAGACCACTCGAGTGTGCCTG[C/T]AGCCAATCAGAGGGCTGGAGGGCTCCGACTACATCAACTCCAGCTTTATTGACGGATACAGGTACGTCGACATCATCATCATTATAAACGAATCTTGTTACTTGTGCGTTTATTTGACGGGGATTGACTTTCTCTCTCCTGTAGACAACAGAAGGCGTATATAGCCACGCAGGGGCCGTTAGCGGAGACCACCGAGGACTTCTGGAGGATGTTGTGGGAGAACAACTCCACCATTGTGGTGATGCTGACCAAACTGCGGGAGATGGGCAGAGTGAGTTTTGTTGGTCAACTGAAATCCAAAATGAAGTTTTTGTGAAATCAAAATGTACAATGGTAAATTTGCGAGCACACGATATCCTCAAACCCCGCCTCCTATTCTTGAATGGGACTCATTTGGCAACCCATAGAAGTGAACACAGAAAAATTATTTTAAAAATTGGTGCAGTAATAGAGATCCACATGAACAGTCGTCTGACTAAATTTGGGTTCCTTAAGCCTCA
Associated Phenotype:
Not determined