ZMP
tcea2
Ensembl ID:
ZFIN ID:
Description:
transcription elongation factor A protein 2 [Source:RefSeq peptide;Acc:NP_957280]
Human Orthologue:
TCEA2
Human Description:
transcription elongation factor A (SII), 2 [Source:HGNC Symbol;Acc:11614]
Mouse Orthologue:
Tcea2
Mouse Description:
transcription elongation factor A (SII), 2 Gene [Source:MGI Symbol;Acc:MGI:107368]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa6723 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa10105 | Nonsense | Available for shipment | Available now |
sa37617 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa6723
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000014222 | Essential Splice Site | 175 | 301 | 6 | 10 |
Genomic Location (Zv9):
Chromosome 23 (position 8833358)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 8791499 |
GRCz11 | 23 | 8726469 |
KASP Assay ID:
554-5461.1 (used for ordering genotyping assays)
KASP Sequence:
CAGACGATTGGAGCAGACTGTGAACACATGGCGGCACAGATCGAGGATTA[T/C]ATCCTTCACATCGAAAGCTAGTGTTGTAGGCCTGGYTGTAATGTTGAACT
Long Flanking Sequence:
AAAAATAAATAAATAAGAGGAACAAACAAGAGAAGCACACAAAATGTAAATTTTATTTTAACTGTTTAAGTTTAGAAATTCATTTGCAACCCCTCATTTGAATTTAGTGTAAACATATTATTCTTCTCTTCTAATAATGTTCAGTAATCAAGGAACTTTTGGTTTGTACAGATGTGTGCATTCATTCTAAGAGAAACAGCCTTTCAAAAAATGTTGCATGCGTTGTGTTCAGGTCATGCATAGAGCATTCCTAGGTGTCAAAGTTGTAGGTGTATGAAATTCTGTTATACGATATTATATATTGTGTCAAGAAAATGTAAAGATTTTTTCATTACGTTGCCGTTGTTGTTATTGTTGTTATTATTATTATTATTATTTTATTTATTTGTTTTTTATTATTATTTTTGCTTGCTTCAAGGAAATTTTGTGTGTATATTCTCAGGTGATCACCAGACGATTGGAGCAGACTGTGAACACATGGCGGCACAGATCGAGGATTA[T/C]ATCCTTCACATCGAAAGCTAGTGTTGTAGGCCTGGTTGTAATGTTGAACTCCATTTCCATTTGCATTTTGTCAGTAAACCCAGATCTGCTTAATCTCTAGAATGTGTTTTCAGATGGAACAACAATTACTTGTAGTCATAGTTCATTAGACAAAATCAAGTTCAAAATCATGCTGTAATTATCAATGAATTTCAGCTTAATGTAGTAAATGCTACACATTTAACGTTTAATACCACGTTTAATGTTTTTACACCACACTCACGTCATAACTTCAGTTTAAAAATAGCTCTTAAGTGTTCAAAATAAATTCTGTGAAATGATTAGATAGTTGTGTTTATAAGTCATGCTGAAGCAGTGATTGCAGTTAAAGCTTTTGTTTATAATGTAAGGCTATGGGAATTTCTTGGGTTTCTTCTTTGTGGGTATTTGGAGTTTCTGCAACATCTGGGGCCTCATGTATCAACGCTGCGTACGCACAAAAACTTTGCATACGCCAGGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10105
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000014222 | Nonsense | 175 | 301 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 23 (position 8831402)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 8789543 |
GRCz11 | 23 | 8724513 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATGTCAAATAATACAACTGTACTTCCTTGACTGGTCCCCTTGATGCACA[T/A]ATTTACCAGGAGTTCAAATCCACCGACATGAAGTACAAGACCAGAYTGAG
Long Flanking Sequence:
GATGTACAAAAGAATATGCGTGAGATTCGGCGTACGCAGTGTTTCATACATCTGAATTTTTTTCTGCGTACGCACATTTAAAATGTTTAAAAATGTTTATGTTTAAAACATTTAAAATGTTTTAGTAAGATTTCCACGCAAGTCTTCGTACATGAGGCCCCTGGTCTTTGGAGGAGATTTACTATTGATCATGGAGCTCTTGACAAATAGAATTTTAATTCATACCAGCTCTGTAATGTTTTTTTTTATGTCAGGATTCATAATTAGCATGCAAAATAGGCCAAATAATAATAGCTAACCAAACCATAACTTCTTAATAATAATAAATATGGCAATGTACTTTGTTACACTTTCCACTAAAGAAATTTAACACACTTTTCTGTCTGCAAAGTTAAATGAGAAATTATTTCAGCTTAAAATTGGCCTTCTTCAACAATGCCATTCTTGAACAATGTCAAATAATACAACTGTACTTCCTTGACTGGTCCCCTTGATGCACA[T/A]ATTTACCAGGAGTTCAAATCCACCGACATGAAGTACAAGACCAGACTGAGGAGTCGTATTTCCAACCTAAAGGACCAAAAGAACCCAGACTTGCGGCGGAATGTCCTGTGTGGAAACATCTCTCCAGAGCGCATCGCCAGCATGACTGCAGAGGTTCGTTTGGATTTGATTTTGGCTCAGAAACTGTTAAACGGCAGCCCTGTCTCTAGAGGTTGTGAAGTGTGTTTGTGTTAATTGCGTGTTTGGCAGGAGATGGCAAGCCCTGAGCTGAAGGAGATCAGGAAAGCGCTGACCAAGGAGTCCATTCGAGAGCATCAGCTCTCCAAAGTGGGCGGAACAGAGACGGACATGTTCGTCTGTGGAAAATGCAAGGGCAAGAACTGCACTTACACTCAGGTATGCGGTTACTGCAGCTTAAAACACTTTTTTTTACACAATGTTTATACCAGAGATGTTTATACTTGCTTCAATTATATAAACGACTATTAATTTGAGGAGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37617
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000014222 | Nonsense | 187 | 301 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 23 (position 8831366)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 8789507 |
GRCz11 | 23 | 8724477 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCTTGATGCACATATTTACCAGGAGTTCAAATCCACCGACATGAAGTA[C/A]AAGACCAGACTGAGGAGTCGTATTTCCAACCTAAAGGACCAAAAGAACCC
Long Flanking Sequence:
CAGTGTTTCATACATCTGAATTTTTTTCTGCGTACGCACATTTAAAATGTTTAAAAATGTTTATGTTTAAAACATTTAAAATGTTTTAGTAAGATTTCCACGCAAGTCTTCGTACATGAGGCCCCTGGTCTTTGGAGGAGATTTACTATTGATCATGGAGCTCTTGACAAATAGAATTTTAATTCATACCAGCTCTGTAATGTTTTTTTTTATGTCAGGATTCATAATTAGCATGCAAAATAGGCCAAATAATAATAGCTAACCAAACCATAACTTCTTAATAATAATAAATATGGCAATGTACTTTGTTACACTTTCCACTAAAGAAATTTAACACACTTTTCTGTCTGCAAAGTTAAATGAGAAATTATTTCAGCTTAAAATTGGCCTTCTTCAACAATGCCATTCTTGAACAATGTCAAATAATACAACTGTACTTCCTTGACTGGTCCCCTTGATGCACATATTTACCAGGAGTTCAAATCCACCGACATGAAGTA[C/A]AAGACCAGACTGAGGAGTCGTATTTCCAACCTAAAGGACCAAAAGAACCCAGACTTGCGGCGGAATGTCCTGTGTGGAAACATCTCTCCAGAGCGCATCGCCAGCATGACTGCAGAGGTTCGTTTGGATTTGATTTTGGCTCAGAAACTGTTAAACGGCAGCCCTGTCTCTAGAGGTTGTGAAGTGTGTTTGTGTTAATTGCGTGTTTGGCAGGAGATGGCAAGCCCTGAGCTGAAGGAGATCAGGAAAGCGCTGACCAAGGAGTCCATTCGAGAGCATCAGCTCTCCAAAGTGGGCGGAACAGAGACGGACATGTTCGTCTGTGGAAAATGCAAGGGCAAGAACTGCACTTACACTCAGGTATGCGGTTACTGCAGCTTAAAACACTTTTTTTTACACAATGTTTATACCAGAGATGTTTATACTTGCTTCAATTATATAAACGACTATTAATTTGAGGAGTACACACAAGAATTTATACACTTAAAGAAATAATGTCA
Associated Phenotype:
Not determined