ZMP
trpa1a
Ensembl ID:
ZFIN ID:
Description:
transient receptor potential cation channel, subfamily A, member 1a [Source:RefSeq peptide;Acc:NP_0
Human Orthologue:
TRPA1
Human Description:
transient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:497]
Mouse Orthologue:
Trpa1
Mouse Description:
transient receptor potential cation channel, subfamily A, member 1 Gene [Source:MGI Symbol;Acc:MGI:3
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
hu2163 | Nonsense | Available for shipment | Available now |
sa19784 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
hu2163
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004407 | Nonsense | 141 | 1115 | 4 | 28 |
ENSDART00000141906 | Nonsense | 152 | 1126 | 4 | 28 |
Genomic Location (Zv9):
Chromosome 2 (position 29846957)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 30148592 |
GRCz11 | 2 | 30132125 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCAACAACAGCCACCAGGCACCCATTCATATGGCAGTCAGTCTGGGC[A/T]AAAACTTTGTCTTAGAGGTGGGTCAATCTCATCTTTTTTCTGCAAACACA
Long Flanking Sequence:
TTTTTTTTTTGTAAATACACACCCTCTAGTGGTGAAAATGGCATAACGTGCCTCTAATTGTTCATATGACGTTTTCCAGTGAAAATTCTAATTTGGGTTAAACTTTCAAGATGTAAAATCTATGATTTTGAAGTACAGCATCCACACTGGTGCAACGACTGCCACACAAACTGCCACACAAACTCCTTAAAACTCCTTAAAACATTCATCCATGCCAAGGAGCCACAAGCCATGTAGATCTGATCATTCCACAAAGATGGTGATAAACAGGCTAAGTTTATGGACTGCAGTTCTGAGTCGACTCTTCTGTTACTGTATTTATTATAATGGTCATCATTTTAGAGCTCAATGTGAGAGATGAGGAGGGAAACACACCTCTTCACTGGGCCGTGCAGAAGGATCAGCCCGGGAGCTGCTCTGTGCTTCTGTCTCTGGGAGCAGATCCAAACGTCCTCAACAACAGCCACCAGGCACCCATTCATATGGCAGTCAGTCTGGGC[A/T]AAAACTTTGTCTTAGAGGTGGGTCAATCTCATCTTTTTTCTGCAAACACAGTAATGTTTTACAAGAAACACTGTATTTATGCTTTTGGTGTAGTTGACATGAGTCTTTTGTGATTACAGCAACTTGTGTCACATAAACAAACTGATGTGAACCTGGAGGGAGATTTGGGAAACACTCCTGTTATTTTATCCGCTGCTTTGGACAACCATGAGGCCCTGGGTATATTGGTAAGTGGATTTTTTTAGTTGGTTTTATTTACTTTACTTTTAAATTTGGTTTAAGATACTTATTTTATGTTCGTTTACTCAACCTCAGGTCATCCGAGATGTACGTAAAATGTTTTCATCTGTAGAACATTAAAGAGGAATTTTAGGAAATACATAATACACAAGACAGAATCAATAAAGACATAAAGGCAAAACTATATTTATATTCATCCATAATATATTTCAATCTCACTTTTTTTTACAGATTGAAAAATACAGATTGCAAAAAATTCC
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa19784
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000004407 | Nonsense | 890 | 1115 | 23 | 28 |
ENSDART00000141906 | Nonsense | 901 | 1126 | 23 | 28 |
Genomic Location (Zv9):
Chromosome 2 (position 29836417)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 30138052 |
GRCz11 | 2 | 30121585 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTACCTGATATTGGGATTTGCTTTGTCCTTCTATGCCTTGATGATCGAA[C/T]AGGTGAGTATAGTGATTGTAAAAGACTGTGTACATATTTAATTTGCAAAT
Long Flanking Sequence:
TTGCTCATCGTTCCCAAACCGTTCTGACAGACTGCTGCAGTCTCACAATTTCATCAGCTCTTTGTTTTAATTGCTAACTTAAAATATGTCTAATGATTGAAACTGTCATCTTGCCTTTGGAAGCGGCTGAATTATTTGCGGGATTTGTCGAACTACATGGACTGGGCGGCTGCGATCTGTGCTCTGCTGTTCGTGGTGCCGCTGCTGATGAATCTGAAGAGCTCGTGGCACTGGCAGGCTGGTGCGCTGGCAGCCCTGACCTCCTGGCTCAATCTGCTCCTCTATCTCCAGCGGTACATCACTGCAAGGATCACAAGTAACATGTCCACTGAAGCATTTGTAAAGCCTTATCTGCAATCTCTTCTGTCCGCAGGTTTGAACGGATTGGTATTTATGTGGTGATGTTTCGAGAGATTTCACGGACACTGCTGAGCATTATCGTTTTGTTTTTTTACCTGATATTGGGATTTGCTTTGTCCTTCTATGCCTTGATGATCGAA[C/T]AGGTGAGTATAGTGATTGTAAAAGACTGTGTACATATTTAATTTGCAAATGTGCAATATTAGCTGAATGCTGTAAAGCAGAGGTGCCTAAACTCTGTATTGGAGGGCTAGTGTCCTGCAGATTTTAGTAGTTTCAAACATATTCAGACACACCTAAATCACATAATCAAACTCTATTTAGGTATACTACAAACTTCCAGACAGGTGTGTTTAGGCAAGTTGGAGCTAAACTCTGCAGGACTCTGCAGAACCAAGTTTGGCAACCTTTGCTGTAAGGGTCCATGTGTAGAATTCAGAAACGCTTGTTATTAGTGACACCGGTGGCCCACAATTGAACTGCAGCAAGCAACTTCTTTTTGCTTCATGTTTGCTACCATCTAGACAAGGGGTAAACCACCCCTGTTCCTGGAGATCTACTTTCTTGCAAATTTTACTTGCAGCCTATATCAAACACTTGCCTGTAATTATCAAGTGCTGTTCAGGTCCAAATTTATTGGTTGA
Associated Phenotype:
Not determined