Busch Lab

ZMP

trpa1a

Ensembl ID:
ENSDARG00000016699
ZFIN ID:
ZDB-GENE-050105-6
Description:
transient receptor potential cation channel, subfamily A, member 1a [Source:RefSeq peptide;Acc:NP_0
Human Orthologue:
TRPA1
Human Description:
transient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:497]
Mouse Orthologue:
Trpa1
Mouse Description:
transient receptor potential cation channel, subfamily A, member 1 Gene [Source:MGI Symbol;Acc:MGI:3

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
hu2163 Nonsense Available for shipment Available now
sa19784 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
hu2163
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004407 Nonsense 141 1115 4 28
ENSDART00000141906 Nonsense 152 1126 4 28
Genomic Location (Zv9):
Chromosome 2 (position 29846957)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 30148592
GRCz11 2 30132125
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCAACAACAGCCACCAGGCACCCATTCATATGGCAGTCAGTCTGGGC[A/T]AAAACTTTGTCTTAGAGGTGGGTCAATCTCATCTTTTTTCTGCAAACACA
Long Flanking Sequence:
TTTTTTTTTTGTAAATACACACCCTCTAGTGGTGAAAATGGCATAACGTGCCTCTAATTGTTCATATGACGTTTTCCAGTGAAAATTCTAATTTGGGTTAAACTTTCAAGATGTAAAATCTATGATTTTGAAGTACAGCATCCACACTGGTGCAACGACTGCCACACAAACTGCCACACAAACTCCTTAAAACTCCTTAAAACATTCATCCATGCCAAGGAGCCACAAGCCATGTAGATCTGATCATTCCACAAAGATGGTGATAAACAGGCTAAGTTTATGGACTGCAGTTCTGAGTCGACTCTTCTGTTACTGTATTTATTATAATGGTCATCATTTTAGAGCTCAATGTGAGAGATGAGGAGGGAAACACACCTCTTCACTGGGCCGTGCAGAAGGATCAGCCCGGGAGCTGCTCTGTGCTTCTGTCTCTGGGAGCAGATCCAAACGTCCTCAACAACAGCCACCAGGCACCCATTCATATGGCAGTCAGTCTGGGC[A/T]AAAACTTTGTCTTAGAGGTGGGTCAATCTCATCTTTTTTCTGCAAACACAGTAATGTTTTACAAGAAACACTGTATTTATGCTTTTGGTGTAGTTGACATGAGTCTTTTGTGATTACAGCAACTTGTGTCACATAAACAAACTGATGTGAACCTGGAGGGAGATTTGGGAAACACTCCTGTTATTTTATCCGCTGCTTTGGACAACCATGAGGCCCTGGGTATATTGGTAAGTGGATTTTTTTAGTTGGTTTTATTTACTTTACTTTTAAATTTGGTTTAAGATACTTATTTTATGTTCGTTTACTCAACCTCAGGTCATCCGAGATGTACGTAAAATGTTTTCATCTGTAGAACATTAAAGAGGAATTTTAGGAAATACATAATACACAAGACAGAATCAATAAAGACATAAAGGCAAAACTATATTTATATTCATCCATAATATATTTCAATCTCACTTTTTTTTACAGATTGAAAAATACAGATTGCAAAAAATTCC
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

Allele Name:
sa19784
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004407 Nonsense 890 1115 23 28
ENSDART00000141906 Nonsense 901 1126 23 28
Genomic Location (Zv9):
Chromosome 2 (position 29836417)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 30138052
GRCz11 2 30121585
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTACCTGATATTGGGATTTGCTTTGTCCTTCTATGCCTTGATGATCGAA[C/T]AGGTGAGTATAGTGATTGTAAAAGACTGTGTACATATTTAATTTGCAAAT
Long Flanking Sequence:
TTGCTCATCGTTCCCAAACCGTTCTGACAGACTGCTGCAGTCTCACAATTTCATCAGCTCTTTGTTTTAATTGCTAACTTAAAATATGTCTAATGATTGAAACTGTCATCTTGCCTTTGGAAGCGGCTGAATTATTTGCGGGATTTGTCGAACTACATGGACTGGGCGGCTGCGATCTGTGCTCTGCTGTTCGTGGTGCCGCTGCTGATGAATCTGAAGAGCTCGTGGCACTGGCAGGCTGGTGCGCTGGCAGCCCTGACCTCCTGGCTCAATCTGCTCCTCTATCTCCAGCGGTACATCACTGCAAGGATCACAAGTAACATGTCCACTGAAGCATTTGTAAAGCCTTATCTGCAATCTCTTCTGTCCGCAGGTTTGAACGGATTGGTATTTATGTGGTGATGTTTCGAGAGATTTCACGGACACTGCTGAGCATTATCGTTTTGTTTTTTTACCTGATATTGGGATTTGCTTTGTCCTTCTATGCCTTGATGATCGAA[C/T]AGGTGAGTATAGTGATTGTAAAAGACTGTGTACATATTTAATTTGCAAATGTGCAATATTAGCTGAATGCTGTAAAGCAGAGGTGCCTAAACTCTGTATTGGAGGGCTAGTGTCCTGCAGATTTTAGTAGTTTCAAACATATTCAGACACACCTAAATCACATAATCAAACTCTATTTAGGTATACTACAAACTTCCAGACAGGTGTGTTTAGGCAAGTTGGAGCTAAACTCTGCAGGACTCTGCAGAACCAAGTTTGGCAACCTTTGCTGTAAGGGTCCATGTGTAGAATTCAGAAACGCTTGTTATTAGTGACACCGGTGGCCCACAATTGAACTGCAGCAAGCAACTTCTTTTTGCTTCATGTTTGCTACCATCTAGACAAGGGGTAAACCACCCCTGTTCCTGGAGATCTACTTTCTTGCAAATTTTACTTGCAGCCTATATCAAACACTTGCCTGTAATTATCAAGTGCTGTTCAGGTCCAAATTTATTGGTTGA
Associated Phenotype:
Not determined