ZMP

myod1

Ensembl ID:

ENSDARG00000030110

ZFIN ID:

ZDB-GENE-980526-561

Description:

Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q90477]

Human Orthologue:

MYOD1

Human Description:

myogenic differentiation 1 [Source:HGNC Symbol;Acc:7611]

Mouse Orthologue:

Myod1

Mouse Description:

myogenic differentiation 1 Gene [Source:MGI Symbol;Acc:MGI:97275]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
hu2023	Nonsense	Confirmed mutation in F2 line	Not yet available
hu2024	Nonsense	Confirmed mutation in F2 line	Not yet available

Mutation Details

Allele Name:

hu2023

Status:

Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000027661	Nonsense	227	275	3	3

Genomic Location (Zv9):

Chromosome 25 (position 32265402)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	30844655
GRCz11	25	31422131

KASP Assay ID:

554-0029.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GATTGTCTGTCCAGCATCGTGGAGCGAATTTCCACAGAGACTCCTGCATG[T/A]CCCGTGCTGTCAGTACCGGAGGGGCACGAAGAGAGCCCGTGTTCTCCGCA

Long Flanking Sequence:

TAGGATAATTCAGCAACATTATTTTTCAACATTTAAGAGAAAGATGGGAATAATTAAAGATCGCTTGTAAATATTTTATCTCTTGTGTTTGCTGATTTAATTTTCTTTTCAATATAAATATAGATTAAAGTGTCTTTTCGTTTCCCAGATGGATTTTATGGGCCCAACGTGTCAGACGAGAAGACGGAACAGCTATGACAGCTCTTACTTCAATGACACACCAAATGGTAAGTTTGCTCGAAAAATAAAATAAAATAAGTTGGCTGAAAAAATGTTTAACTGTTATGCAAAGTTAAACTATTCTTTTGGATTGAGTTTAAAAGTAAACTATTATGTTTCTAAATTCTCATAGACTAATTTTATTTGAGTTAAAAAAATAAAAATCTTTCTGTTTGTTTGTTTTTTCTAGCTGACGCACGGAATAATAAAAACTCAGTGGTGTCGAGTTTGGATTGTCTGTCCAGCATCGTGGAGCGAATTTCCACAGAGACTCCTGCATG[T/A]CCCGTGCTGTCAGTACCGGAGGGGCACGAAGAGAGCCCGTGTTCTCCGCATGAGGGATCTGTCCTGAGTGACACCGGAACCACCGCACCGTCCCCGACCAGCTGCCCTCAACAGCAGGCTCAGGAAACCATTTATCAAGTGCTTTAAAATTCTGCAACATTTCAAAACAAATTGAAAAAGACAATCTGAATGAAGAAACTTTCAGCAGAAAAAGGCGAATCCGACCTTTAACGACAAAAGAAAGACTTTTGATCCACTGCTGGAAACTAGGAAAGAATGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATAGACTAATTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATGCGGTGGAAAA

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461

Mutation Details

Allele Name:

hu2024

Status:

Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000027661	Nonsense	273	275	3	3

Genomic Location (Zv9):

Chromosome 25 (position 32265266)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	30844519
GRCz11	25	31421995

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CACCGTCCCCGACCAGCTGCCCTCAACAGCAGGCTCAGGAAACCATTTAT[C/T]AAGTGCTTTAAAATTCTGCAACATTTCAAAACAAATTGAAAAAGACAATC

Long Flanking Sequence:

TTCGTTTCCCAGATGGATTTTATGGGCCCAACGTGTCAGACGAGAAGACGGAACAGCTATGACAGCTCTTACTTCAATGACACACCAAATGGTAAGTTTGCTCGAAAAATAAAATAAAATAAGTTGGCTGAAAAAATGTTTAACTGTTATGCAAAGTTAAACTATTCTTTTGGATTGAGTTTAAAAGTAAACTATTATGTTTCTAAATTCTCATAGACTAATTTTATTTGAGTTAAAAAAATAAAAATCTTTCTGTTTGTTTGTTTTTTCTAGCTGACGCACGGAATAATAAAAACTCAGTGGTGTCGAGTTTGGATTGTCTGTCCAGCATCGTGGAGCGAATTTCCACAGAGACTCCTGCATGTCCCGTGCTGTCAGTACCGGAGGGGCACGAAGAGAGCCCGTGTTCTCCGCATGAGGGATCTGTCCTGAGTGACACCGGAACCACCGCACCGTCCCCGACCAGCTGCCCTCAACAGCAGGCTCAGGAAACCATTTAT[C/T]AAGTGCTTTAAAATTCTGCAACATTTCAAAACAAATTGAAAAAGACAATCTGAATGAAGAAACTTTCAGCAGAAAAAGGCGAATCCGACCTTTAACGACAAAAGAAAGACTTTTGATCCACTGCTGGAAACTAGGAAAGAATGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATAGACTAATTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATGCGGTGGAAAATGTAATTCCAATATGAGAAAAGACTCAGCAGATCAGCAGAAGTGAGTTTCTTAACTAAGCTTATTTATATTGTTATATCCACGTGAAAATGTGACCATATTTTTTTCCCTTTGTGAATATATTTTCTGTCACCATC

Associated Phenotype:

Not determined